Enterocloster clostridioformis: QMP25_06685
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Entry
QMP25_06685 CDS
T10536
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eclf Enterocloster clostridioformis
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eclf03032
]
QMP25_06685 (topA)
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_06685 (topA)
Enzymes [BR:
eclf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QMP25_06685 (topA)
DNA replication proteins [BR:
eclf03032
]
Prokaryotic type
DNA Topoisomerases
QMP25_06685 (topA)
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QMP25_06685 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
DUF7340
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
XBX15616
LinkDB
All DBs
Position
1220866..1222953
Genome browser
AA seq
695 aa
AA seq
DB search
MANYLVIVESPAKVKTIKKFLGANYEVDASGGHVRDLPKSQLGFDAEHDYEPKYITIRGK
GDVLAKLRKEVKKADKIYLATDPDREGEAISWHLMKALKLDELKSKDVYRISFNEITKNA
VKASFKTPRELDMNLVNAQQTRRMLDRMVGYRISPLLWAKVKRGLSAGRVQSVALRMICD
REDEINAFIPEEYWNLEADLLLKGNRKPLAAKYYGTRDSKGGKTVIRNKEELDQILSQLE
GCRYEVEEVKRGERVKKAPIPFTTSTLQQEASKALNFSTQKTMRLAQQLYEGVEVKGKGT
LGLITYLRTDSTRIADEADTAARAFVKEHYGEKYVAQGSQAKKEGAKIQDAHEAIRPTDI
TLTPTIVKESLQRDLFRLYQLIWKRFTASRMAPAVYETTSVKIGAGSHLFTTSASKLDFE
GFMSVYVEADDEEEKNQVLGNLEKGAILKLEQLDPSQHFTQPPAHYTEASLVKALEEQGI
GRPSTYAPTITTIIARRYVVKENKNLYVTELGDVVNRIMKNSFPSIVDPNFTANMESLLD
KVADGTVVWKTVVSNFYPDLDEAVKTAEKELESVKIADEVSDVVCDLCGRQMVIKYGPHG
KFLACPGFPECKNTKPYLEKIGIPCPKCGKELVRRKTKKGRLYYGCEASPDCDFMSWQKP
STQKCPVCGSYMVEKGNKLLCAGETCGYRMNKTEK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattatctggtaattgtagagtcaccagcaaaagtgaaaaccatcaagaagttt
ctgggcgccaactatgaggtagatgcatcgggaggccatgtcagggatcttccaaagagc
cagttgggatttgatgcggagcatgactatgagcccaagtacattacaatcagaggaaag
ggagacgttctggctaagctgcgcaaggaagtgaagaaggcagacaagatctatcttgca
acggaccctgaccgcgagggagaggccatttcatggcatctgatgaaggctcttaagctg
gatgagcttaagagtaaggatgtttaccgcatcagtttcaatgaaattacgaagaacgcg
gtaaaggcatccttcaagactcccagggagcttgacatgaacctggtgaatgcccagcag
accagaaggatgctggatcgtatggtgggttaccggattagtccgcttttgtgggcaaag
gtcaagagaggattgagtgcaggccgtgtacagtccgttgctctgcggatgatttgcgac
cgcgaggacgaaatcaatgcattcattcctgaggaatactggaatctggaggcagacctt
ctcctgaaaggaaataggaagcctttggcggcaaaatattatgggaccagggattccaag
ggcggtaagacagttatccgcaacaaagaagagctggatcagatactgagccagttagag
ggatgcagatatgaggtggaggaagtaaagagaggggagcgggtaaagaaggcgcccatc
ccgtttacaaccagtactctgcagcaggaagcctccaaggcgcttaacttttccacacaa
aaaaccatgcgtctggcccagcagctctatgaaggcgtggaggtaaaaggcaagggaacc
ctgggtcttatcacctacctgcgtacggattccaccagaatcgcagacgaggcggacaca
gcggccagggcatttgtaaaggaacattacggcgagaaatatgttgctcagggaagccag
gctaaaaaagagggcgctaagatacaggacgcgcacgaggccatccgtcccactgacata
acattgactccgaccattgtaaaggaatccctgcaaagagacctgttccggttataccag
ttaatctggaagcggtttacagccagccgtatggcgccggccgtatatgagaccacctct
gtaaagattggggcgggcagccacctgttcaccacatcggcctccaagctggattttgaa
ggctttatgtctgtttatgtggaagcggacgatgaggaagagaaaaatcaggtccttggc
aacctggaaaagggggccatccttaagctggagcagctggacccaagccagcatttcacc
cagcctccggcccattatacggaggcatccctggtaaaggctctggaggagcagggcata
ggacgtccgagtacctatgcacccaccataaccaccatcattgccagaagatatgtggta
aaggagaacaagaatctctatgtgactgagctgggggatgtggtaaaccgcatcatgaag
aattcctttccaagcatcgtagaccctaactttacagctaatatggaatccctgctggat
aaagtggcggacggtaccgttgtctggaaaaccgttgtcagcaacttctatcctgatctg
gatgaggctgttaagacagctgagaaggagctggaatccgtaaagattgcggatgaggtg
tcggatgtggtctgcgacctgtgcggacgccagatggtgattaagtacggtcctcacggc
aagttcctggcatgcccgggatttccggagtgtaagaacaccaagccttaccttgaaaaa
atcgggattccatgtccgaagtgcggtaaggagctggtgcgcaggaagacaaagaaggga
cgtctctactatggatgcgaggccagtcctgactgcgacttcatgtcctggcagaagcct
tccacccagaaatgcccggtctgcggatcttatatggtggagaaaggaaataagcttttg
tgtgccggcgagacctgcgggtaccgcatgaataagactgaaaaatag
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