Enterocloster clostridioformis: QMP25_10945
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Entry
QMP25_10945 CDS
T10536
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QMP25_10945
09124 Replication and repair
03420 Nucleotide excision repair
QMP25_10945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclf03021
]
QMP25_10945
03036 Chromosome and associated proteins [BR:
eclf03036
]
QMP25_10945
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_10945
Enzymes [BR:
eclf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
QMP25_10945
Transcription machinery [BR:
eclf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QMP25_10945
Chromosome and associated proteins [BR:
eclf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
QMP25_10945
DNA repair and recombination proteins [BR:
eclf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QMP25_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
IstB_IS21
Cupin_NOL9
Motif
Other DBs
NCBI-ProteinID:
XBX16379
LinkDB
All DBs
Position
complement(2112223..2114640)
Genome browser
AA seq
805 aa
AA seq
DB search
MGNHSQPQIRISVRNLVEFVMRSGDLDNRRTAGAKKEAMQAGSRLHRKIQKRMGASYRSE
VMLRYQVQEDMFDILVEGRADGIITEPAGVTIDEIKCIYMDVSRLEEPEPVHLAQALCYG
WFYSIQNELDSVGIQITYCNIETEEIRRFNEVRSFEELKSWFEGLIHEYVKWARYLYHHG
IRRQECLKELPFPYPYREGQKELAGNVYRSIARKRNLFIQAPTGVGKTLSTIYPSLKAMG
EGHGEKLFYLTAKTITRSVAEEAFSILRREGHLYFNTVTITAKEKLCVMEKPDCNPQACP
RAKGHYDRVNDAVYEIIQEVDGITRDKVLEYAQRYQICPFEFCLDISNWVDGIICDYNYV
FDPNVRLKRYFDQGEPGQGYLFLVDEAHNLVPRAREMYSASLIKEDVLLTKRILKTQTGS
GKVIAQLDKCNQRFLELKRSYGGDEGGRRTVLGSTYELLPDVNALALNLMTMFGELETFM
NENIEFPDRDLVLEFYFAVRDFLYVYDRLDEHYRIYDQILTDGSFMVKLLCINPAANLKE
CLDKGVSTLFFSATLLPIQYYKELLSGNQEEYAVYAKSPFPQENRMVLAASDVSSRYSRR
GPSEYEKIVDYICRVAEGKKGNYMVFCPSYQYLHAIEDILAAREASGALSFIWNAQTNHM
TEEDREAFLQSFEEERDCSMAALCVMGGIFSEGIDLKEERLIGAVIIGTGLPQVNTEQEI
LKEYFDEQGEHGFDYAYQYPGMNKVMQAAGRVIRTIRDRGIIALLDDRFLRPEYVALFPR
EWGTYTVVNRYNVDQAVRAFWDGTK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttggggaatcattcacagcctcagatacgcatttcggtgcggaatctggtggagtttgta
atgagaagcggggatctggacaaccggaggacggcaggggccaagaaggaggccatgcag
gccggcagcaggctgcaccggaagattcagaaacgtatgggagcctcctaccgttccgag
gtgatgctgcggtatcaggtgcaggaggacatgttcgatatcctggtggagggaagggcg
gacggaatcatcaccgagcctgccggagttaccattgatgagattaagtgtatctatatg
gatgtatccaggctggaagaaccggaaccggtccatttggcccaggccctgtgctacggc
tggttttacagcatccaaaatgaactggattccgtcggcatccagattacctactgtaat
atagagacagaggaaattcgtcgttttaatgaggtcagaagctttgaggagctgaaatca
tggtttgaggggctgattcatgagtatgtcaaatgggccagatacctgtatcaccacggg
atacgccgccaggagtgcttaaaggagctgccctttccttatccctacagggaaggacag
aaggagctggctgggaatgtgtaccgatccattgccagaaagcgcaacctgttcatccag
gcgcctaccggagtggggaaaaccctgtccaccatctaccccagtctgaaggccatgggt
gagggccatggcgagaagctgttttacctgaccgccaagaccattaccaggagcgtggcg
gaggaagcattctccattttaaggcgggagggacatctctattttaatacagttaccatc
acagccaaggaaaagctctgcgtcatggaaaagccggactgcaatccccaggcatgtccc
agggccaagggccattacgaccgggtcaatgacgctgtctatgaaatcatccaggaggtg
gacggcatcaccagggacaaggtgctggaatatgcccagagatatcagatatgtcccttt
gaattctgtctggatatcagcaactgggtggacggcatcatatgcgattacaattatgta
tttgaccccaatgtaagactgaaacggtattttgaccagggggagccgggccagggctac
ctgtttctggtggatgaggcccataacctggtgcccagggccagggagatgtacagcgcc
agcctcataaaggaggatgtgctactgacaaaacgtattttaaagacacagaccggatcg
ggaaaggtcattgcccagctggataagtgcaaccagaggttcctggaattaaagcgttcc
tacggcggggatgagggcgggcgcaggacggttctgggaagcacctacgagctgctgccg
gatgtgaatgccctggccctgaatctgatgaccatgttcggggaactggaaacctttatg
aatgagaatatagagtttccggacagggacctggtgctggagttctactttgcggtccgg
gatttcctgtatgtgtatgacaggctggacgaacattacaggatatatgaccagattctc
acggacggcagctttatggtaaagcttctgtgcatcaacccggccgcgaatctgaaggaa
tgcctggacaagggcgtcagcaccctgtttttctcagccacccttcttcccatccagtac
tataaggaacttttaagcggtaaccaggaggaatacgctgtctacgcaaagtcacccttt
ccccaggaaaaccgcatggtgctggctgccagtgatgtcagcagccgctacagccgcagg
gggccttccgagtatgagaagattgtggactatatatgccgggtcgcggaaggaaaaaag
gggaattatatggtattctgtccctcttaccagtatctccacgccatagaggatattctg
gctgccagggaggcgtcaggggccctttcttttatctggaatgcccagacaaaccatatg
acggaggaggacagggaggcgtttctgcaaagctttgaggaggaacgggattgttccatg
gcagcgctgtgcgtcatgggagggattttttcagagggaatcgacttaaaagaagagcgc
cttatcggcgctgtgatcattggaaccggactgccccaggtgaacacggagcaggagatt
ctaaaggaatatttcgatgagcaaggggaacatggctttgactacgcgtaccagtatccg
ggaatgaacaaggtgatgcaggcagccgggcgggttatcaggaccatccgcgacagggga
atcatcgctctgttagacgaccggttccttcgcccggaatacgtggccctgtttccgagg
gaatgggggacctacaccgtggtcaaccgctacaacgtggaccaggccgtgagggcgttt
tgggacggaacaaaatag
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