Enterocloster clostridioformis: QMP25_23635
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Entry
QMP25_23635 CDS
T10536
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QMP25_23635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_23635
Enzymes [BR:
eclf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
QMP25_23635
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QMP25_23635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XBX11401
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All DBs
Position
complement(4517865..4518728)
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AA seq
287 aa
AA seq
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MSRIILGSHVGMSGKDMFLASVKEAESYGANALMIYTGAPQNTKRKDISELNIDTGLDYA
KKIGIKDVVIHAPYIINLANTVKPETFELGVEFLANELKRTAAFSSKTLVLHPGSHLGVG
VEAGIDQLVKGLDLVLERDETDVLIALETMAGKGSEIGKTFEELSMIYERVKKRERLRVC
FDTCHVNDAGYDLVLGYEDVLSQFDRLIGLEQIAVIHVNDSLNPCGSHKDRHANIGTGSI
GLETLRRIVHDERFSQIPKILETPFLCPDGAAKKTLPPYRQEIEQLL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaattatattaggctcccatgttggaatgtcgggaaaggatatgttcctggct
tcggtaaaggaggcggaaagttacggcgcaaacgccctgatgatttatactggcgctccg
caaaatacaaagcgaaaagatatttctgaactcaatatcgacacaggtttggactatgca
aagaaaatcgggataaaagatgtggttatccatgcaccgtatattatcaatctcgcaaac
acggtaaagccggaaacctttgaattgggcgttgaatttctcgccaatgaattaaagcga
accgccgcattttccagcaagaccttagtgttgcatccgggttctcatttaggcgtgggt
gttgaagctggcatcgaccagcttgtaaaaggtcttgatcttgttttggagcgagatgaa
acggacgttttgattgctctggaaacaatggccggaaaaggcagcgaaatcggaaagaca
tttgaagaattgagcatgatttatgagcgcgtgaaaaagcgcgaacgtcttagggtatgc
tttgatacctgccatgtaaatgacgccgggtatgacttggtgttgggttatgaagatgtc
ctgtcccaatttgacaggttgatcggattagagcaaatcgccgttatccatgtaaacgac
agccttaatccttgcggctctcacaaagaccgccacgccaatatcgggacaggcagcatt
gggctggaaaccttacggcggattgtccatgatgaacgattctcccaaattcccaagata
ttggaaactccatttttatgtccagatggagcagcaaagaaaacccttccaccctaccgg
caagaaattgagcaactattatag
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