Enterocloster clostridioformis: QMP25_24425
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Entry
QMP25_24425 CDS
T10536
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QMP25_24425 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclf03019
]
QMP25_24425 (rny)
Messenger RNA biogenesis [BR:
eclf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QMP25_24425 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DcuC
AllH
Motif
Other DBs
NCBI-ProteinID:
XBX11545
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All DBs
Position
complement(4667371..4668921)
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AA seq
516 aa
AA seq
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MSQIMVPMMIIVMIVVAIITWFAARNYERKQYDSKVGSAEEKSREIIDDALKTAETKKRE
ALLEAKEESLKTKNELEKETKERRAELQRYEKRVLSKEENVEKKADALEKKEADLVRREN
ILSKRTAEVEAQYEQGIQELERISGLTSEQAKEYLLKSVEEDVKHDTAKLIKELENKAKE
EADKKARDLVVTAIQRCAADHVAETTVSVVQLPNDEMKGRIIGREGRNIRTLETLTGVEL
IIDDTPEAVVLSGFDPIRREVARIALERLIVDGRIHPARIEEMVEKAQKEVENNMREEGE
AACLEVGIHGIHPELVKLLGKMKFRTSYGQNALKHSIEVSQLSGLLASELGVDVRLAKRA
GLLHDIGKSVDHDMEGTHVQLGADLCKKYKESATVLNAVESHHGDVEPTSLIPCIVQAAD
TISAARPGARRETLETYTNRLKQLEDITNSFKGVDKSFAIQAGREVRIMVVPEQISDDDM
ILLARDVSKRIEDELEYPGQIKVNVIRESRVTDYAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagataatggtccctatgatgattatcgttatgatagttgtggctattattact
tggtttgctgcacgcaattacgagaggaagcagtatgacagcaaggtaggaagtgcagaa
gaaaaatcaagggaaataatagatgatgcattaaaaaccgcagagacaaagaagcgagaa
gctctcctggaagccaaggaagaatctttaaagacgaaaaatgagttagagaaggaaacc
aaggaaagaagagcggaacttcaacgttatgaaaaacgtgtattaagcaaggaagaaaac
gttgaaaaaaaggcagatgccctggaaaagaaggaggcggacctggtcaggagggaaaac
attctcagtaagcgtactgcagaagtggaagcccagtatgagcaggggatacaggaactg
gaacggatatccggtctaacctccgaacaggcaaaagaatatcttttaaaatctgttgaa
gaagatgtaaaacatgacacagctaaattaattaaggaacttgaaaacaaggcaaaggaa
gaagctgacaagaaggccagggatttagtggtgactgccattcagcggtgcgccgcagac
catgtggctgagacaacggtttctgttgtacagcttcctaacgacgagatgaaaggccgc
atcatcggacgagagggccgcaacattcgtacccttgagacccttaccggtgtggaactg
attatcgacgataccccggaagcagtagtattgtccggatttgatccaatacgtagagaa
gttgctagaattgcgttggagcgtttgattgtggacggacgtattcatccggccagaatt
gaggagatggtagagaaggcacagaaagaagtggagaacaacatgagggaagagggcgag
gcagcctgtcttgaagttggcatccacggaattcatccggaattagttaagttacttggt
aagatgaagttcaggaccagctatggccagaatgcattaaagcattctattgaggtgtcc
cagctgtcaggacttttggcgtcagaacttggagtggatgtacggttagccaaacgtgcc
ggtttattacatgatattggtaaatccgttgaccatgacatggaaggcacccatgttcag
ctaggtgcagacctgtgtaagaaatataaggaatctgctacagtgctgaatgcggtggaa
tcccatcatggcgacgttgaacctaccagcctcattccctgcattgtgcaggcagctgat
accatatctgctgcaagacccggtgcaaggcgtgagactctggagacatatacaaacaga
ttgaaacaattagaagatataaccaattcctttaagggagtggacaagtcttttgccatt
caggcaggccgagaggttcgtatcatggtagttccggaacagatcagcgatgacgatatg
atattgctggcaagagatgtttcaaaacggattgaggacgagctggaatatccgggacag
attaaggtaaatgtgattcgtgaatcaagagttacggattacgcgaagtaa
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