Enterocloster clostridioformis: QMP25_25140
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Entry
QMP25_25140 CDS
T10536
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03020
RNA polymerase
Brite
Enzymes [BR:
eclf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QMP25_25140 (rpoC)
Transcription machinery [BR:
eclf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QMP25_25140 (rpoC)
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QMP25_25140 (rpoC)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBX11667
LinkDB
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Position
complement(4804323..4808039)
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AA seq
1238 aa
AA seq
DB search
MLMPETNETYHPMTFDAIKIGLASPDKILEWSHGEVKKPETINYRTLKPEKDGLFCERIF
GPSKDWECHCGKYKKIRYKGVICDRCGVEVTKASVRRERMGHIKLAAPVSHIWYFKGIPS
RMGLILDISPRTLEKVLYFASYIVLDPGSTSLQYKQVLSEKEYREEVEKYGGTGGFRVGM
GAEAIQELLSAINLEKDSTELRRALADSTGQKRARIIKRLEVVEAFLTSGNRPEWMIMDV
IPVIPPDIRPMVQLDGGRFATSDLNDLYRRIINRNNRLARLLELGAPDIIVRNEKRMLQE
AVDALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KIYQCGLPKEMAIELFKPFVMKELVSNGTAHNIKNAKKMVERLQPEVWDVLEDVIKEHPV
MLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECR
FLLLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPEAKGEGMVFKSVNEAILAYENQE
ATLHSRVKVRVSKTMPDGTVKTGTIDSTIGRFIFNEIIPQDLGFVDRSIPENELKLEVDF
HVAKKQLKQILEKVINVHGATQTAVTLDDIKAIGYKYSTRAAMTVSISDMTVPESKPKLI
EEAQATVDRIAKNYRRGLITEEERYKEVIETWKTTDDQLTHDLLTGLDKYNNIYMMADSG
ARGSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALR
TADSGYLTRRLVDVSQDLIIREVDCCEGRDIPYMEIKAFMDGNEVIEDLEERITGRYIAE
TITDPDTGEVVVKANHMCTPKRAAAVMKVLNKTGRGSVKIRTVLSCKSHIGVCAKCYGAN
MATGQPVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPK
GLAIITEFGGVVQIKDTKKKREITVTDNETGNAKTYLIPYGSRIKVMDGQVLEAGDELTE
GSINPHDILKIKGVRAVQDYMLQEVQRVYRLQGVEINDKHIEMIVHQMLKKIKIEESGDS
DVLPGVSMDVLDYNEMNEALIADGKKPAEGRQVMLGITKASLATDSFLSAASFQETTKVL
TEAAINGKVDHLIGLKENVIIGKPIPAGTGMKRYRKVKLDTDDLISDEIMLSDDDELVVS
SEDESGSGLTEDNVAEEVLGMDDMADVDEEDDAIEEEE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgccagaaactaatgaaacttatcatccaatgacatttgatgccattaagatt
ggtctggcctcccctgataagattctggagtggtcccatggcgaggtgaagaagccggag
accatcaactacaggacacttaagcccgagaaggacggtctgttctgtgagagaatcttc
gggcctagtaaggactgggagtgtcattgcggtaaatataaaaagattcgttataaaggt
gttatctgcgaccgctgcggcgtagaagtgacaaaggcaagtgtccgtagagagcgtatg
ggccacattaagctggctgctcccgtatcccatatatggtatttcaagggaattcccagc
cgtatgggtctgattctggacatctcccccagaacgctggagaaggtgctgtactttgcg
tcctatatcgttctggacccaggctccaccagcctgcagtataagcaggtcctgtccgag
aaggagtacagggaggaagtggagaagtacggcggcaccggcggcttccgtgtgggaatg
ggcgccgaggccatccaggaactgctgagtgccattaatctggaaaaggattccacagaa
ctcagaagggcgctggcggattccaccggacagaagcgcgcgagaatcatcaagaggctg
gaggtagtggaggcattccttacctcaggcaaccgtcctgagtggatgattatggatgtg
attcctgtcatccctccggatatccgtcccatggtacagctggacggcggacgtttcgcc
acctctgatttgaatgacttatacagaagaatcatcaacaggaacaaccgtctggcaaga
ctgctggagttaggcgctcctgatatcattgtacgcaacgagaagcgtatgctccaggag
gcagtggatgccctgattgacaacggacgccgcggcaggcctgtgaccggccccggcaac
agagcccttaagtccctttccgatatgttaaagggtaagcagggacgtttccgtcagaac
ctgttaggcaagcgtgtggactattccggacgttccgttatcgtggttggacctgagctt
aagatataccagtgcggtcttccaaaggaaatggccattgagctgtttaagccttttgtt
atgaaggagctggtttccaacggaaccgcccacaatataaagaatgccaagaagatggta
gagagactacagcctgaggtgtgggatgtgcttgaggatgttatcaaagagcatcctgtc
atgctgaaccgtgcccctactctgcacagactgggtatccaggcatttgagcctatcctg
gtagagggtaaggcaatcaagctgcatcctctggtgtgtacggctttcaacgctgacttt
gacggcgaccagatggctgtccatctgccgctgtccgtagaggcccaggcagagtgccgt
ttcctgctcttaagccctaacaacctgttaaagccttctgacggcggccctgtggctgtt
ccttcccaggatatggtgcttggtatctattacctgacccaggagcgtccggaagcaaag
ggcgagggcatggtatttaagagcgtcaacgaggcgattctggcatatgagaaccaggag
gcaacccttcattcacgcgttaaggtgagggtcagcaagaccatgccggacggtactgtg
aagacggggaccattgactccaccatcggacgtttcattttcaatgaaatcattcctcag
gatctgggatttgtggacagaagcattccggagaacgagctgaagctggaagtggatttc
cacgttgccaaaaagcagttaaagcagattcttgagaaggtcatcaacgtacacggcgca
acccagacagccgttaccctggatgacatcaaggccattggttataaatattccaccagg
gcggccatgaccgtttctatttccgatatgaccgtgcctgagagcaaaccaaagctgatt
gaggaagctcaggcaacagtggaccgcattgcgaaaaactaccgccgcggactcatcacc
gaggaagagcgctacaaagaggttatcgagacatggaagaccaccgatgaccagctgacg
cacgacctgctgaccggcctggataagtacaacaatatctacatgatggctgactccgga
gcccgtggttctgataagcagattaagcagctggcaggtatgcggggactgatggcagat
accaccggtcataccattgagcttcctatcaagtccaatttccgtgagggactggacgta
ttggagtactttatctcggctcatggagcccgtaaaggcctgtccgatacggctctgcgt
acggctgactcaggttacctgaccagacgtctggtagacgtatcacaggatttaattatc
cgtgaagtggactgctgcgagggcagggatatcccatacatggaaatcaaggctttcatg
gatggaaatgaagtaatcgaggacctggaagagagaatcacagggcgctatatcgctgag
accatcactgacccggatacgggagaggttgtggtcaaggctaaccatatgtgtacaccg
aagcgcgccgcagctgtcatgaaggtgctgaataagacaggacgggggtccgtaaagatt
cgtaccgtcctcagctgtaagtcccatatcggtgtgtgcgccaagtgttacggcgccaac
atggcaacgggccagcctgtacaggtgggcgaggctgtcggcatcatcgcggcacagtcc
atcggtgaacctggtacacagcttaccatgcgtacgttccatacgggcggcgtggccggt
ggcgatatcacacagggtcttccccgtgtggaggagcttttcgaggcccgtaagccaaag
ggtcttgccatcattaccgagttcggcggcgtggtgcagattaaggatacaaagaaaaag
cgcgagattacggtaaccgacaatgagaccggcaacgccaagacctatctgattccttac
ggatccagaatcaaggtaatggacggccaggtgctggaagccggcgacgagctgacagaa
ggcagcattaacccccatgatattctgaaaatcaagggtgtccgtgcggtgcaggattac
atgctccaggaagtacagcgtgtataccgtctccagggcgtggaaatcaacgataagcat
attgagatgattgttcaccagatgcttaagaaaatcaagattgaggagagcggcgacagc
gatgtgctgccgggcgtatccatggatgttctggattacaacgagatgaacgaggccctg
attgccgacggcaagaagccggcagaaggcagacaggtcatgctgggtatcaccaaggca
tccctggcaacggattccttcttgtcagcagcatccttccaggagaccaccaaggttctg
accgaggcagccatcaacggcaaggttgaccacctgattggcctgaaggagaacgtaatc
attggtaagccgattccggcaggtaccggcatgaagcgttaccgcaaggtgaagctggac
acagacgatttgatttcagatgagatcatgctgtctgatgacgatgaactggtagtctct
tccgaggatgagagcggcagcggactcacagaggacaatgttgccgaggaagttctggga
atggacgatatggcggatgtggatgaggaagacgatgccatagaggaagaagaatag
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integrated database retrieval system
