Enterocloster clostridioformis: QMP25_25770
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Entry
QMP25_25770 CDS
T10536
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QMP25_25770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_25770
Enzymes [BR:
eclf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
QMP25_25770
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QMP25_25770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XBX11783
LinkDB
All DBs
Position
complement(4927650..4928261)
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AA seq
203 aa
AA seq
DB search
MKELSIGTHLSVAKGYAALAKDAVQIGANTFQLFIRNPRGARAKELKPGEIETFLDILQK
HGFGPFIAHDPYTLNLCSSSRHLRELSVQMMGEDLQRMELMPGNLYNLHPGSRLDQPLDS
AIEQITQGLNHVMFPDMKTTVLLENMSGKGSEAGRRFEELKEILDRVVQKDQIGVCMDAC
HMWDSMTVSFAWIFCGGHGKKYE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattatcaatcggaacccatctttcagttgccaaaggatacgccgctctggca
aaggacgcggtccaaatcggtgccaatacattccagctgttcatccgcaatccccgggga
gccagggcaaaggagttaaaaccgggggagatcgagacattcctggacattttgcaaaag
cacggttttgggccgtttatagcccatgatccgtatactctgaatctctgctcgtcaagc
cggcatctgagggaactatccgtccagatgatgggggaggatctgcagcggatggagctg
atgccgggaaacctgtacaatcttcatccgggcagccgtctggaccagcctctggacagc
gccattgaacagatcacccaggggctgaaccatgtgatgttcccggacatgaagacaacg
gtgctgttagaaaacatgtccgggaagggaagcgaggcggggagaaggtttgaagaactg
aaggagatattggaccgggtggtccaaaaggatcaaatcggggtttgcatggatgcctgc
cacatgtgggattctatgaccgtatctttcgcctggatattttgtggcgggcatggaaag
aagtacgagtaa
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