Enterocloster clostridioformis: QMP25_30865
Help
Entry
QMP25_30865 CDS
T10536
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QMP25_30865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_30865
Enzymes [BR:
eclf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QMP25_30865
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QMP25_30865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
HHH_5
OB_YrrC
AAA_11
Viral_helicase1
UvrD-helicase
UvrD_C
PIF1
AAA_22
AAA_28
HHH_2
AAA_18
HHH
ABC_tran
nSTAND3
5_3_exonuc
AAA_17
NTPase_1
AAA_16
cobW
DEAD
Helicase_RecD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XBX12667
LinkDB
All DBs
Position
complement(5898205..5900481)
Genome browser
AA seq
758 aa
AA seq
DB search
MNYRGTYDGKIFHNPSNKFCIVIVKTADTSIPEQARDKRRYKDHLIRFTAVGYEIPMTDA
VELELEGEWVNGKYGMQFQVEQWHEIVPKTKEGVLSYLGSGLIKGIGEKTAEEIVAKFGT
GTLDILEKHPERLLEVRGITENKLEDIRTSFAESRMLRDIMTLLAPFKLTPKTALKIYQH
FGPACLDLLKKSPFELCQIPGFGFRRVDAIVRKTDNRPRDPMRIRGALHCTLDEAKGKQG
HLFLGREELCKAAFKLLNEKIPLPELRVQPEEVERELDAMILGGSVVSMRDNIYHPAAFS
QEDETASRIARLLAEERPPMKDISAVIEAVRAEQGLRTSGKQESAVRTAFLYNLSVITGS
PGTGKTTVLKIILEVYRRLYPDRKIVLMAPTGRASRRMAESTGFDEASTLHSGLGLVSEE
DEANRSRKKDSLDADLVIVDEFSMVDMWLAGKFFTALKSGAKIVLVGDPDQLPSVGAGNV
FKELIQCGLVPVTVLDEIFRQAKDSFIAHNARLIHDGNTKLYYGNDFQFLPCDNQEDAAA
AIIERYCQEIENNGIEHVQILSPFRTEGAASSDHLNAAIREIVNPFRSTEDEIRVGTKTF
RIGDRIMQTKNTDKVSNGDLGFIRYMEDTPDGKRIGLEFGEDRSLEYSTEDLVNLDLAYA
TTIHKAMGSEYDIVLMPVLKAHYIMLYRNLLYTGITRAKKRVVLAGEKSVLFMAIHKNEI
SKRNTLLGERICLYYRAYAKSAGLTMPEFPEEKLKAAG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaattatagaggcacttatgacgggaagatattccataacccgtcaaataaattctgt
attgtaatagtaaagactgcggatacttccattccggagcaggcaagggataagaggcgg
tataaggaccacctgatccgttttaccgctgtcggctatgagattcccatgacggatgcc
gtggagctggaactggaaggggaatgggtaaacggaaaatacggcatgcagttccaggtg
gagcagtggcatgagatcgtgcccaaaacaaaggaaggcgtgctgagctatctcggttcc
ggcctcattaaaggaatcggggaaaagactgccgaagagattgtggcaaagtttggcaca
ggtacgctggacatactggaaaagcacccagaacggcttctggaggtacgggggataacg
gagaataagctggaggatatccggacttcctttgcggagagccgcatgctccgggatatc
atgacccttcttgcgccttttaagctgacgccgaagacggcgcttaaaatctaccagcat
ttcggaccggcctgcctggaccttttgaaaaaaagtccgtttgagctgtgccagataccg
ggttttgggttccggcgggtggatgccattgtaagaaagacggataaccgtccccgcgat
cccatgcggatcagaggcgcgctccactgcacactggacgaggcaaagggaaagcagggg
catttgttcctgggaagggaagaactgtgcaaagcggcatttaagctgctgaacgaaaaa
atcccgctcccggaactgcgtgtacagccggaagaagtggaaagggaactggacgctatg
atcctgggcggttctgtggtatccatgagggataatatctaccatcctgccgcattttcg
caggaggatgagactgccagccggatcgcaaggctgctggcggaggaaaggccgccgatg
aaagacatatctgccgtaatcgaggcagtcagggcagagcaggggcttcggacttccgga
aaacaggaatccgcagtccggacagcatttctctataacctgtccgtgatcaccggttca
ccgggcacaggaaagacgaccgtgctcaaaatcatcttggaagtttaccgcagactgtat
cccgacagaaagattgtccttatggcgcctacgggccgtgcaagccgcaggatggcggaa
agcaccggttttgacgaagcaagcacccttcacagcgggctcggcctggtcagtgaagag
gacgaggcaaaccgcagcaggaaaaaagacagcctggatgcggatcttgtgatcgtggac
gagttttccatggtggatatgtggctggcaggcaaattttttaccgctttgaagagcggg
gcaaaaatcgtcctggtcggtgacccggaccagctgcccagcgttggagccggaaacgta
ttcaaggaactgatccagtgcggccttgtgccggttacggtgctggatgaaatcttccgt
caggcaaaggacagtttcattgcccataatgcacggcttatccacgacggcaataccaaa
ctgtattacggaaatgactttcagttcctgccctgtgacaatcaggaagacgcggcagca
gctatcattgaaagatactgccaggagattgaaaacaacgggattgagcatgtacagatc
ctttccccattccggacagaaggggcggcatcctcagaccatttaaacgcggctatccgg
gagattgtgaacccgttccgttctacggaagatgaaatccgtgtaggaaccaaaacattc
cgtatcggagaccgcatcatgcagacgaagaatacagataaggtgtcaaatggagatctg
ggctttatccgctatatggaggatacgccggatggaaaacggatcggcctggaatttggc
gaggaccgcagcctggaatacagtacagaggatttagtgaaccttgaccttgcctatgcg
acaacgatccataaggccatgggttccgagtatgatattgtgctgatgccggtgctgaaa
gcccattacatcatgctctaccggaaccttctgtacaccgggatcacccgggcgaagaaa
cgggtggtgctggcaggcgaaaagagcgtgctgttcatggccatacacaagaatgagatc
agcaaaaggaatacccttctgggagagcgcatctgcctgtactacagggcttacgcgaaa
agcgccgggcttaccatgccggaattcccggaagaaaaactgaaagcggcaggttaa
DBGET
integrated database retrieval system
