Enterocloster clostridioformis: QMP25_33265
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Entry
QMP25_33265 CDS
T10536
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QMP25_33265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_33265
Enzymes [BR:
eclf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QMP25_33265
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QMP25_33265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
Helicase_RecD
AAA_22
PIF1
UvrD-helicase
nSTAND3
HHH_2
NTPase_1
NPHP3_N
T2SSE
AAA_28
UvrD_C
AAA
AAA_16
MeaB
SRP54
SLFN-g3_helicase
AAA_24
FtsK_SpoIIIE
ABC_tran
Sacchrp_dh_NADP
TrwB_AAD_bind
KTI12
AAA_23
Motif
Other DBs
NCBI-ProteinID:
XBX13110
LinkDB
All DBs
Position
6386337..6388628
Genome browser
AA seq
763 aa
AA seq
DB search
MATITGFIERIKFRNEENGYTVMSVTDQSDGEEVIMVGNLAYASEGDMIEASGHMTQHPV
YGEQLQIESYEMKIPQDELSMERYLGSGAIKGIGAALAARIVRHFKADTFRVMEEEPERL
SEVKGVSEKMAMAIAEQVEDKKDKRQAMMFLQNYGITINLAAKIYQEYGPALYGIIRENP
YRLADDIPGVGFKMADEIAERVGIFTDSDYRIKAGILYTLLLATANGHTYLPQAELFVQA
SELLKVEPSAMEKHLMDMQIDRKVVVKPSAQGALVYSSHYYYLELNAARMLHDLNIKGDI
PQAEIKANLLKIQQQESIHLDELQEKAVYEAVNSGLLVITGGPGTGKTTTINTIIRYFEM
EGMEILLAAPTGRAAKRMTEATGYEARTIHRMLELVPVGMSGNDAPVIPGAPRSGRGAQS
MGMHFDRNEENPLDADVIIIDEMSMVDISLMHSLLRAVNVGTRLILVGDVDQLPSVGPGN
VLRDIIESGSFNVVKLTHIFRQAAQSDIVVNAHKINAGEPVDLAKRSQDFLFIRRDNPDA
VISAAITLIQKKLPDYVHANAFDIQVMTPMRKGALGVERLNQIMQNYLNPPDKTKKEKEA
GGTIYRVGDKVMQIKNNYQMEWEVRNKSGIPVDKGAGIFNGDVGIIREINEFAELLTVEF
DEGKMIEYSFKQLEELELAYAITIHKSQGSEYPAVIIPMYNGPRMLMTRNLIYTAVTRAR
ACVCLVGQPDAFYTMAANCVEQKRYSGLKSRIGEIYAQPDSIG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaataacaggatttatagaacggatcaagttccgcaacgaagaaaacggctac
acagtaatgagcgtcacggatcagagcgacggggaagaagtcatcatggtaggcaatctg
gcttatgcctcagagggcgatatgatagaagccagcggccatatgacccagcatccggtg
tacggggagcagcttcagatagaaagctatgagatgaagataccccaggatgaactgtcc
atggaacgctatcttggctccggcgccatcaaaggcatcggggccgctttggctgcccga
atcgtgcgccatttcaaggcagacaccttccgggtcatggaggaggagccggagcgcctg
tccgaagtaaagggcgtcagcgagaagatggccatggccatagccgagcaggtagaggac
aagaaggacaagcgtcaggccatgatgttcctccagaattacggcattaccataaatctg
gcagccaagatatatcaggagtacggtcccgccctgtacgggattatccgggagaatccc
taccgcctggcagatgatattccgggagtgggctttaagatggctgacgagatagcggag
cgggtgggaatcttcacggattccgattaccgtatcaaggcaggtattctgtacactctt
cttctggctaccgccaacggccatacctatcttccccaggcagagctgtttgtccaggca
tcagagcttttaaaagtagagccgtccgccatggaaaagcacctgatggatatgcagata
gaccgaaaggtggtggtaaagccatctgcccagggcgccctggtctactcctcccactac
tattatctggagctcaatgcagcccgtatgctgcatgacctgaacatcaagggggatatt
ccccaggccgaaatcaaggccaatctccttaaaatacagcagcaggagtccattcacctg
gatgaactgcaggaaaaggcggtatacgaagctgtgaacagcggcctgctggttatcacc
ggtggtcccggtaccggcaagacaaccaccatcaatacaatcatccggtattttgagatg
gagggaatggaaatccttctggcagcgcccacgggccgggcagccaagcggatgacggag
gcaacaggatatgaggccaggaccatccaccgtatgctggagctggtcccggtgggaatg
tccggcaatgatgcccctgtgattcccggcgctccaaggtcaggcaggggagcccagagc
atggggatgcattttgacagaaatgaggagaatcctctggatgccgatgtcatcatcata
gatgagatgtcaatggtggatatcagcctcatgcattccctgctgagggcggtgaatgtg
ggcacccggctcatcctggtgggggatgtggaccagctccccagcgtggggccgggaaat
gtactgcgggatattatcgaatccggcagcttcaatgtggtgaagctgacccacatcttc
cgccaggccgcccagagcgacattgtggtcaacgcccacaaaatcaatgcaggagagcct
gttgacctggcaaaacgcagccaggacttcctctttatccgaagggacaatcccgacgct
gtcataagcgcagccatcaccctgattcagaagaagctgcctgactacgtacacgccaat
gcctttgatatccaggtcatgacgcccatgcgaaagggcgccctgggcgtggagcgcctg
aaccagattatgcagaattacctgaatccgccggacaagacaaagaaggaaaaagaggcg
ggcggtaccatctaccgggtgggcgacaaggtcatgcagataaagaacaactatcagatg
gagtgggaggtccgcaacaagtccggtatacccgtggacaagggagccggaattttcaac
ggcgacgttggaattatccgggaaatcaatgaatttgcggagctgctcaccgttgaattt
gatgagggcaagatgatagagtacagcttcaagcagctggaggagctggaattagcctat
gccatcaccatccacaagtcacagggaagcgaatacccggcagttatcatccccatgtac
aacggtccccgcatgcttatgacccgcaatctcatatacacggccgtgacccgcgcccgc
gcgtgcgtatgtctggtggggcagccggatgcattttacaccatggcggcaaactgcgtg
gaacagaagcggtattccgggcttaaaagcaggatcggggagatatatgcgcagccggat
tccattggctga
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integrated database retrieval system
