Enterobacter cloacae GGT036: EC036_16430
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Entry
EC036_16430 CDS
T03429
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
eclg
Enterobacter cloacae GGT036
Pathway
eclg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EC036_16430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclg03019
]
EC036_16430
03009 Ribosome biogenesis [BR:
eclg03009
]
EC036_16430
Enzymes [BR:
eclg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EC036_16430
Messenger RNA biogenesis [BR:
eclg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EC036_16430
Ribosome biogenesis [BR:
eclg03009
]
Prokaryotic type
rRNA processing factors
EC036_16430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Arr-ms
Motif
Other DBs
NCBI-ProteinID:
AIV29290
UniProt:
A0AAW6NW39
LinkDB
All DBs
Position
complement(1783742..1786846)
Genome browser
AA seq
1034 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDQME
TPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSDEEPAERKLPEQPALATFIMPEAPPE
SALEKPAAKPAAQKPAVAAKAEPAQPGLLSRFFGALKKMFAGEEVQPEQPKEEPKAAKPE
RQQDRRKRQNNRRDRNDRSDRNERRDNRSDNNEGREQREDNRRNRREKQQQNVEDREIRQ
QAGDESEKSKQRDEQQPRRERNRRRNDEKRQAQQDVKNLNREEPAEQQETEQEERTQVMP
RRKQRQLTQKVRVGAVQAEETAAVAAEVTETTTGTQVAKVDLPAVVENQIEQDENGENRD
NAGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPMTVACASPEMASGKVWIRYPVAR
PEQAVEEQAVTEEVIAPAPAAAVEEVVTEAATVVEPQVVETEAPHAVDVETTHPEVIAAP
VDAAPQLIAEEDAVVAEEVAEEAEPVAAVEETAETIVETTTEEVVQDVEIQVEPVVEEAK
APEVKPEPVKVAVAPAHVATAPMTRAPAPEYVPEAPRHSDWVRPEFNFEGKGAAGGHSAT
HKATAPATRPQSVE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatatcgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggtaaaatcacccgcattgaaccaagccttgaggctgcatttgtcgattac
ggtgctgagcgtcatggtttcctccctctgaaagaaatcgcccgcgaatatttccctgct
aactacaacgctcatggccgtccgaatatcaaagatgttctgcgtgaaggtcaggaagtg
attgttcagattgataaagaagagcgcggcaacaaaggtgccgcactgacaacctttatc
agcctggcgggaagttatctggtactgatgccaaacaacccgcgtgcgggtggtatctct
cgccgtatcgaaggcgatgaccgtaccgaactgaaagaagcgctggccagtcttgaactg
ccggatggcatgggtcttatcgtgcgtaccgccggtgtgggcaaatctgccgaagcgctg
cagtgggacttaagcttccgtctgaagcactgggaagctatccagaaagcagcagaaagc
cgccctgctccgttcctgatccaccaggaaagtaacgttattgtacgagccttccgcgac
tatctgcgtcaggatatcggtgaaattctcatcgacaacccgaaggtgcttgagctggct
cgccagcacatcgccgcactgggtcgtccggacttcaccagcaaaatcaaactgtacacc
ggcgaaatcccgctgttcagtcactatcagattgaatcccagattgagtccgccttccag
cgtgaagtgcgtctgccatccggcggttctatcgttatcgataccacagaagcgctgacc
gctatcgacatcaactccgcacgtgcgacgcgcggcggcgatatcgaagagaccgccttc
aacaccaaccttgaagccgctgatgaaatcgcccgccagctccgcctgcgcgacctgggt
ggtctgattgttatcgactttatcgacatgacccctgttcgtcaccagcgtgcagttgaa
aaccgtctgcgcgaagcggtgcgccaggatcgtgcgcgtatccagattagccatatttca
cgcttcggcctgctggagatgtcccgccagcgcctgagcccgtctctgggcgaatccagc
catcacgtttgcccgcgctgctccggtaccgggaccgttcgtgataacgaatctctgtct
ctctctattctgcgtctgattgaagaagaagcgctgaaagagaacaccaaagaggttcac
gccattgttccggtgccaattgcctcctacctgctgaacgaaaaacgtgccgcggtgagt
gccattgaagcgcgccagggcggcgttcgctgcatcatcgtgccaaacgaccagatggaa
acgccgcactatcacgtgctgcgtgtccgtaaaggcgaagagaccagcacgctcagctac
ctgctgccgaagctgcatgaagaagagatggcgctgccatctgatgaagagccagccgag
cgtaaactgccagagcagcctgcgttagcgaccttcatcatgccggaagctccgccagaa
agtgccctggaaaaaccagcggctaaacctgcggcacaaaaaccggcagtggcggcaaaa
gccgagccagcacaaccgggtctgctgagccgtttctttggcgcgctgaagaaaatgttc
gcaggtgaagaagttcagccagagcagccgaaagaagaacctaaagcggctaaacctgag
cgtcagcaggaccgtcgtaagcgtcagaacaaccgccgcgatcgtaatgaccgcagcgac
cgtaacgagcgtcgtgacaaccgttcggacaacaatgaaggccgtgagcaacgcgaagac
aaccgtcgcaaccgtcgcgagaaacaacagcagaacgttgaagatcgtgaaattcgccag
caggcgggcgatgagtccgagaagagcaaacagcgcgacgagcagcagcctcgccgtgag
cgtaaccgtcgccgtaacgacgaaaaacgccaggcgcagcaggacgttaaaaacctgaat
cgcgaagagcctgctgagcagcaggagaccgagcaggaagaacgtactcaggttatgcca
cgtcgtaagcagcgccagctgactcagaaagtgcgcgtcggtgctgttcaggcagaagaa
accgcagctgtcgcagccgaagtgacagaaaccacaacgggcacgcaggttgcgaaagtt
gacctcccggccgtcgtggaaaatcagatagagcaggatgaaaacggtgaaaaccgtgac
aacgcgggtatgccgcgtcgctcgcgccgttctccgcgtcatctgcgcgtgagcggtcag
cgtcgtcgtcgctaccgtgacgagcgttacccaacgcagtccccaatgccaatgaccgtg
gcgtgcgcgtcacctgaaatggcatccggtaaagtctggatccgctaccctgttgctcgc
ccggaacaggctgttgaagaacaggcagtgaccgaagaggtgattgcaccagcaccagca
gcagcggtagaagaggttgtaacggaagcggcaaccgtggttgaaccacaggttgttgaa
actgaagcacctcacgctgtggacgtcgaaaccacccatccagaagtgattgccgccccg
gttgatgccgcgccgcagcttattgccgaagaagatgccgtggtggctgaagaagtcgct
gaagaggctgaacctgtagccgcagtggaagaaaccgctgaaaccatcgttgaaaccacg
accgaagaggttgtgcaggacgttgagattcaggttgaacctgttgttgaagaagcgaaa
gcgccggaagtgaaacccgagccggtgaaggttgccgtcgcgcctgcgcacgttgccaca
gcaccgatgactcgcgcccctgcgcctgagtatgtgcctgaagcaccgcgtcacagcgac
tgggttcgcccggagttcaacttcgaaggtaaaggtgctgccggtggtcacagtgctacg
cacaaggctactgcaccagcaacccgtccgcagtcagttgaataa
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