Enterobacter cloacae GGT036: EC036_20640
Help
Entry
EC036_20640 CDS
T03429
Name
(GenBank) RNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
eclg
Enterobacter cloacae GGT036
Brite
KEGG Orthology (KO) [BR:
eclg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclg03019
]
EC036_20640
Enzymes [BR:
eclg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EC036_20640
Messenger RNA biogenesis [BR:
eclg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EC036_20640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
WHD_HA2
AAA_19
T2SSE
nSTAND_NTPase5
nSTAND3
NACHT
ResIII
PhoH
DUF6145
SLFN-g3_helicase
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIV29711
LinkDB
All DBs
Position
2224297..2228277
Genome browser
AA seq
1326 aa
AA seq
DB search
MESADVVLYSNHYKEILSGSALPVNAMTEQQKLTFPMLLQQLDSLMLRDKQRFARRLHGV
KKVKNPDAQQAIFQEMAKAIEQAAGKVVLREAARPAITYPENLPVSQKKQEILNAVRDHQ
VVIVAGETGSGKTTQLPKICMELGRGVKGLIGHTQPRRLAARTVANRIAEELQTEPGGCI
GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK
ELLPRRPDLKIIITSATIDPERFSKHFNNAPIIEVSGRTYPVEVRYRPIVEEAEDTERDQ
LQAIFDAVDELGNESAGDILIFMSGEREIRDTADALSKRDLRHTEILPLYARLSNSEQNR
VFQPHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASAN
QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV
EAPDKRNIQDGVRLLEELGAITTDEQATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC
VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS
NQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI
GMKDAEKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIDPEWVEP
VAQHLLKRSYSEPHWERAQGAVIATEKVTVYGLPVVAARKVNYSQIDPALCRELFIRHAL
VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD
SWWKKASKETPDLLNFEKSMLIKEGAESVSKLDYPNFWHQGNLKLRLTYQFEPGTDADGV
TVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTP
LELPLLDALEREFRRMTGTTIDREDWNWDQVPDHLKITFRVVDDKNKKLQEGRSLTALKE
ALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIK
LFDNPQEQQQMMWRGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCIS
CGVDKLIHEAGGPVWSEECFAQLHEKVRAELNDTVVDIAKQVEQILTTVFNINKRLKGRV
DMTMALGLSDVKAQMAGLVYRGFVTGNGFNRLGDTLRYLQAIEKRLEKMAIDPHRDRAQM
LKVENVQQAWQQWLNKLPPARRDDEDVQAIRWMIEELRVSFFAQQLGTPYPISDKRILQA
MEQISA
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagcgctgatgtggtactctatagcaatcattacaaagagattttatccggcagt
gcactgcccgttaatgctatgacagaacaacaaaaattgaccttcccgatgctcctgcaa
cagcttgattcactgatgctgcgcgataaacagcgctttgctcgccgcttgcacggggtg
aagaaggttaaaaatcctgatgcacaacaggccattttccaggagatggcgaaagcgatt
gaacaggcggcagggaaagttgtgctgcgcgaagcggctcgtccggcaatcacctatccg
gaaaacctgcccgtcagtcagaagaagcaggagatcctcaacgccgtgcgcgaccaccag
gtggtgatcgtggcgggggagaccggctcgggtaaaaccacacagctgccaaaaatctgt
atggagctcggccgcggagtgaagggcctgattggtcatacccagccgcgtcgtctggcg
gcgcgtaccgtggcgaaccgtattgccgaggagctgcaaacggagccgggcggctgcatc
ggttataaggtgcgtttcagcgaccatgtgagcgataacaccatggtcaagctgatgacc
gacggtatcctgctggcggaaattcagcaggatcgtctgctgatgcagtacgacaccatc
attattgatgaggcgcacgagcgcagtctgaacatcgacttcctgctcggctacctgaaa
gagctactgccgcgtcgcccggatctgaaaattatcatcacctccgcgaccatcgacccg
gagcgtttctcaaaacatttcaataacgcaccgattattgaagtctccggtcgtacctat
ccggtagaagtgcgctatcgcccgatcgtggaggaggcggaggataccgagcgcgaccag
ttgcaggcaattttcgacgccgttgacgaactgggcaatgagagcgcgggcgacattctg
atctttatgagcggcgagcgtgagatccgcgataccgccgacgcgctcagcaagcgcgat
ctgcgccacacggaaattttgccgctttacgcacgtctctccaacagtgaacagaaccgc
gtgttccagccacacagcgggcgccgcatcgtgctggcaaccaacgtggcggaaacctcg
ctgaccgtgccgggcatcaagtatgtgatagatccgggtacggcgcgtatcagccgctac
agctaccgcaccaaggtacagcgtctgccgattgagccggtttcacaggcgtcggccaac
cagcgtaaagggcgctgtggacgtgtgtcggaggggatctgtattcgtctctattcagaa
gacgatttcctctcccgcccggagtttaccgacccggagatcctgcgcaccaacctcgct
tccgtcatcctgcagatgaccgcgctggggctgggcgatatcgccgctttcccgtttgtc
gaagcgccggacaaacgcaatattcaggacggcgtacgcctgctggaagagctgggggcg
atcaccactgacgagcaggccaccgcgtataaactgacgccgctgggacggcagctcagc
cagttgccggtggacccgcgtctggcgcgcatggtgctggaagcgcaaaaacacggctgt
gtgcgcgaggcgatgatcatcacctcggcgctctccattcaggatccgcgtgaacggcca
atggacaaacagcaggcgtcggatgaaaaacaccgtcgcttccacgacaaagagtcggat
ttccttgccttcgtgaacctgtggaactacctcggcgagcagcagaaagcgctgtcatct
aaccagttccgccgtcagtgccgcgtggatttcctcaactacctgcgcgtgcgcgagtgg
caggatatttacacccaactgcgccaggtggtgaaagagctgggtattccggtgaacagt
gaaccggcggagtaccgagagattcacatcgcattgctgaccggactgctgtcccatatc
ggcatgaaggacgccgaaaagcaggagtataccggcgcgcgcaacgcccgtttctccatc
ttccccggctccgggttgttcaagaaaccacccaagtggaccatggttgctgaactggtg
gaaaccagccgtctgtgggggcgtattgccgcgcgtatcgatccggaatgggtggagccg
gtggcgcaacacctgctgaaacgctcatacagtgaaccgcactgggagcgcgcgcagggg
gcggtgattgcaaccgaaaaagtgaccgtctacggcctgccggtggtggccgcgcgtaag
gtcaactacagccagattgacccggcgctgtgccgcgagctgtttatccgccacgcgctg
gtggagggcgactggcagacgcgtcacgccttcttccgtgaaaacctcaagctgcgtgcc
gaagtggaagagctggagcacaaatcccgccgtcgcgacattctggtggatgacgagacg
ctgttcgaattttacgaccagcgcatcagccacgatgtcatttccgcccgccactttgac
agctggtggaagaaggccagcaaagagacgccggacctgctcaactttgaaaagagcatg
ctgattaaagaaggggcggagtcggtcagtaagctcgactacccgaacttctggcatcag
ggcaaccttaagctgcggctgacctatcagtttgagccgggaacggacgcggatggagtc
accgttcatatcccgctgccactgctaaaccaggtggatgagagtggatttgagtggcaa
attcccggcctgcgccgcgaactggtgattgcgctgatcaaatcgctgccgaaaccggtg
cggcgtaactttgttccggcccctaactacgccgaagcgtttttaggccgcgtcacgccg
ctggaactgccgctgctggatgcgctggagcgtgagttccgccgcatgaccggtaccacc
attgaccgcgaagactggaactgggatcaggtgcccgatcacctgaaaatcaccttccgc
gtggtggacgataaaaacaagaagctgcaggaaggccgttcgctcaccgcgctgaaagag
gcgctgaaaggcaaagtgcaggagaccttgtccgcggtggcggatgatgggattgagcag
agcgggctgcacatctggagctttggtcagctccccgaaagctacgagcaaaaacgcggc
aactacaaagtgaaggcctggcctgcgctggtggatgagcgcgacagcgtggcgatcaag
ctgtttgataacccgcaggaacagcagcagatgatgtggcgcgggctgcgccgcctgctg
ctgctcaacatcccgtcgccgatcaagtatctgcacgagaagctgccgaacaaagccaag
ctggggctgtactttaacccgtacggcaaagtgctggatctgatcgacgactgcatctcc
tgcggcgtggacaagctgatccacgaggcgggcggtccggtctggtcagaagagtgcttt
gctcagcttcatgaaaaggtacgcgcggagctgaacgacaccgtggtggatattgccaaa
caggtcgagcagatcctcaccaccgtgttcaatatcaacaaacgcctgaaagggcgcgtg
gatatgaccatggcgctggggctttcggatgtcaaagcgcagatggcgggcctggtgtac
cggggctttgtcaccggcaatggcttcaaccgtctcggcgacacgctgcgttacctgcag
gcgattgaaaaacggctggagaaaatggccatcgatccgcatcgtgaccgtgcccagatg
ctgaaagttgaaaacgtgcagcaggcgtggcagcagtggttaaacaaactgccaccggca
cgtcgtgacgatgaagacgttcaggcgatccgctggatgatcgaagagttacgcgtcagc
ttctttgcccagcagctcggtacgccgtatccgatttcggataaacgtattttgcaggcg
atggagcagatttcagcttaa
DBGET
integrated database retrieval system
