Enterobacter cloacae GGT036: EC036_39230
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Entry
EC036_39230 CDS
T03429
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eclg
Enterobacter cloacae GGT036
Pathway
eclg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EC036_39230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclg03019
]
EC036_39230
03009 Ribosome biogenesis [BR:
eclg03009
]
EC036_39230
Enzymes [BR:
eclg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EC036_39230
Messenger RNA biogenesis [BR:
eclg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EC036_39230
Ribosome biogenesis [BR:
eclg03009
]
Prokaryotic type
rRNA helicases
EC036_39230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIV31570
UniProt:
A0A0M7DZD4
LinkDB
All DBs
Position
complement(4249409..4251304)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAQIQPTAEGEELD
IETLAAALLKMAQGERTLIVPPDAPMRPRREFRDRDDRFERRGDRNDRGPRGDRSERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRDSRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagct
cttaacgatctcggttacgaaaaaccatctccgatccaggcagaatgtatcccacatctg
ctctctggtcgtgacgtgctgggcatggcccagactggtagcggcaaaaccgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggcggttcaggttgcggaagcgatgacggaattctctaaacac
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtacactggatctctctaaactgagcggtctggtactggatgaagccgacgaa
atgctgcgtatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggaaggt
caccagaccgctctgttctctgccaccatgccagaagcaatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgttaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtaacggctacaacagcgcagcgctgaatggcgacatgaac
caggctctgcgtgagcagacgctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtaaactac
gacatcccaatggactctgagtcttacgttcaccgtatcggccgtaccggtcgtgcaggt
cgtgcgggtcgtgccctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccggaagcggagctgccaaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtccagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgcagattcagccaaccgctgaaggcgaagagctggat
atcgaaacgctggctgcagcactgctgaagatggcacagggcgaacgtaccctgatcgtg
ccaccagatgcaccgatgcgtcctcgtcgtgagttccgcgatcgtgacgatcgcttcgaa
cgccgtggtgaccgtaacgatcgtggcccacgtggtgaccgttcagagcgtggtggcgaa
gaccgtccacgtcgtgaacgtcgtgacgctggcgaaatggaactgtaccgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcatatcgttggcgcgatcgcgaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcgcatctcactccaccatcgagctg
ccaaaaggcatgccgggcgaagtactgcagcactttactcgcacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggtgaacgt
cgtggcggtggtcgcggtttcggtggcgagcgtcgtgaaggcggtcgtagcgaaggtcgc
ggtggtgaaggacgtcgtttctccggtgaacgccgtgatagccgtggcccacgtcgtgaa
gaaggcaccagccgtcgtcgttttggtgacgcttaa
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integrated database retrieval system
