Enterobacter cloacae ECNIH5: ECNIH5_00980
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Entry
ECNIH5_00980 CDS
T03706
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecli
Enterobacter cloacae ECNIH5
Pathway
ecli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH5_00980 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecli03021
]
ECNIH5_00980 (rho)
03019 Messenger RNA biogenesis [BR:
ecli03019
]
ECNIH5_00980 (rho)
Transcription machinery [BR:
ecli03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ECNIH5_00980 (rho)
Messenger RNA biogenesis [BR:
ecli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECNIH5_00980 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIX57413
LinkDB
All DBs
Position
201742..203001
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggactggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
caacacgctaagagtggcgaagatatctttggcgacggtgtgctggagatactgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctccaaaagagggtgaacgctactttgcgctgttgaaggttaatgaagtcaac
tacgacaaaccggaaaactcccgcaataagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgtctgcgtatggagcgtggtaacgggtctactgaagacttaaccgctcgt
gtgctggatctggcatcgccaattggtcgtggccagcgtggtctgattgtggcgccgcca
aaagccggtaaaaccatgctgctgcaaaacatcgcgcagagcattgcttacaaccatcca
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggggaagtggttgcgtcaaccttcgacgagcctgcttcccgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgattccattacccgtctggcgcgtgcctacaacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggctccaaaatggacgaagttatttacgaagagtttaaaggtacaggcaac
atggaactgcacctttctcgtaaaatcgcagaaaaacgcgtcttcccggcgatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggcgaaatcgacgcaatggaattcctcatt
aacaaactggcgatgactaaaacgaacgacgatttcttcgacatgatgaaacgctcgtaa
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