Enterobacter cloacae ECNIH5: ECNIH5_03960
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Entry
ECNIH5_03960 CDS
T03706
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ecli
Enterobacter cloacae ECNIH5
Brite
KEGG Orthology (KO) [BR:
ecli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecli03016
]
ECNIH5_03960
Enzymes [BR:
ecli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ECNIH5_03960
Transfer RNA biogenesis [BR:
ecli03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ECNIH5_03960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIX57961
LinkDB
All DBs
Position
complement(836453..837007)
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AA seq
184 aa
AA seq
DB search
MSESKRLFFAIELPTTLQRQIVRWRASHFPADAGRPVVAANMHLTLAFLGEVSAEKQRAL
SAMAGRISQPGFTLHLDDAGQWLRSRVVWLGTRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDAGQAVAIPPPGFHWSFQVNEFALYESAFVQGRTRYTPLQRWTLGDTLRN
PDEV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcaaaacggctattcttcgccattgaattacccaccacgcttcaacggcaa
attgttcgctggcgcgccagccacttccccgcggatgcgggccgccctgtcgtcgccgcc
aatatgcacctgacgttagcttttcttggcgaggtgagcgcagaaaagcagcgcgcgtta
agcgcaatggccggacgcatttctcagccgggttttacgctgcatcttgacgatgccggg
caatggctgcgctctcgggtggtctggctggggacgcggcagcccccccgcggactgctc
cagctcgccaacatgctgcgggcacaggccgcgcgcagcggctgttatcagagcccgcag
ccgtttcatccccacattaccctgctgcgcgatgcgggtcaggctgttgccatcccgcca
ccgggctttcactggtcctttcaggtgaatgaatttgcgctgtacgaatctgcctttgta
caaggacgcacccgctatactccgctccagcgctggacgctgggcgatacgttaaggaat
cctgatgaagtttag
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