Entry |
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Name |
(GenBank) ATP-dependent RNA helicase RhlE
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KO |
|
Organism |
ecli Enterobacter cloacae ECNIH5
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ecli00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH5_06735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ecli03019]
ECNIH5_06735
Enzymes [BR:ecli01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECNIH5_06735
Messenger RNA biogenesis [BR:ecli03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECNIH5_06735
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1422193..1423575
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AA seq |
460 aa
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVHEYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPTR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKSSGK
PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ |
NT seq |
1383 nt +upstreamnt +downstreamnt
atgtcttttgattcccttggtctgaacccggaaattctgcgcgccatcgcagagcagggc
tacgttgagccaacccctattcagcagcaggctatcccggccgttttgcagggccgtgac
ctgatggcaagcgcgcagaccggtactggtaagaccgcgggctttaccctgccgctgctg
gagctgctggtaaaaaaccagccacacgccaaaggccgtcgtccggtgcgtgcgctgatc
ctcaccccaacccgcgagctggcggcccagattggtgagaacgtgcatgaatacagccgc
tatctcaacattcgttcgctggtagttttcggcggggtaagcattaacccgcagatgatg
aagctgcgcggcggcgtcgacgtgctggtggcaaccccggggcgtctgctggatctcgaa
caccagaacgcggtgaagctcgataacatcgaaattctggtgctggacgaagccgaccgt
atgctcgacatgggcttcatccacgacattcgccgcgtgctggcgaagctgccgacgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtcgcgcgccgcaacaccgcctccgagcaggtg
acgcagcacgtgcattttgtagataagaagcgcaagcgggaactgctctcccagatgatc
ggccagggcaactggcagcaggtgctggtctttacccgcaccaagcacggcgccaatcac
ctggcggaacagctgaataaagatggcatccgcagcgcggccattcacggcaacaagagc
cagggcgcgcgtacccgcgcgctggcagacttcaagtccggcgacatacgcgtgctggtg
gcaaccgacatcgccgcacgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgttcaccgtatcggccgtaccggacgcgcggcg
gcaaccggggaagcgctctctctggtttgcgtggatgagcacaagctgctgcgcgacatc
gaacgcctgctgaagaaagagatcccgcgtattgaaaccccgggctatgaagttgacccg
tcaatcaaagccgagccaattcagaacggtcgtcagggtggcgggcgcggtcagggcggc
ggtggtcgcggtcagcagccgcgtcgtgccgaaggcggcgcgccgaaatcttcgggcaaa
ccgccgcgtcgtaataacgacagcaaaccggccggtgaaaacccatggcgtagcggcgaa
gggaaaccggcaggcgaggggcagcgccgacgccgcccgcgtaagcctgctaacccgcag
taa |