Enterobacter cloacae ECNIH5: ECNIH5_17195
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Entry
ECNIH5_17195 CDS
T03706
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ecli
Enterobacter cloacae ECNIH5
Pathway
ecli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECNIH5_17195 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecli03400
]
ECNIH5_17195 (recD)
Enzymes [BR:
ecli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ECNIH5_17195 (recD)
DNA repair and recombination proteins [BR:
ecli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECNIH5_17195 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
T2SSE
MukB
CbiA
SRP54
ATPase
Phageshock_PspD
UvrD_C
NTPase_1
TrwB_AAD_bind
NPHP3_N
AAA
Motif
Other DBs
NCBI-ProteinID:
AIX60390
LinkDB
All DBs
Position
complement(3650011..3651831)
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AA seq
606 aa
AA seq
DB search
MTMQDLLLEAVEQRVLRQLDVQFAMMIAADQPAVMLAAALLSKDAGEGHVCLPLSRLVVD
EKMAPVLQSCFALLGERVDWQKILRESSAVGPGENQAPLILTGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQTLDRLFDSGEPTDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQRCRIRLAAPTGKAAARLTESLGGAMQQLPLTQEQLALFPGEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVVFLGDRDQL
ASVEAGAVLGDICTYASYGYTAARAQELARLTGCSLEPDHSPVAGALRDSLCLLQKSYRF
GSNSGIGQLAAAVNRGDRHATRTVFDGSFTDIEKKSLQSGEEYQAMLEEALQGYQRFLSC
VQQRSQPGQVIAAFGEYQLLCALREGPFGVAGLNDRLEQLLVQKRKINRQQHSRWYEGRP
VMISRNDSTLGLFNGDIGIALDRGNGLRVWFQLPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELVYTAVTRARQRLSLYADERVLGQAIATRTERRSGLS
AIFESV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggacttattgctggaagcggtagagcaacgcgtgctgcgtcagctggac
gtgcagtttgccatgatgattgccgctgaccagcccgccgtgatgcttgccgctgccctt
ttgagtaaagacgccggagaggggcatgtgtgtctgccgctctcgcgtctggtagttgac
gagaaaatggcgcctgtcctccagtcctgctttgcgctgctgggggagagggtggactgg
cagaaaattttgcgcgaatcgtcggccgtcgggccgggagaaaaccaggcgccgctgatc
ctgacgggggagcgcttatatctgaaccgtctgtggcgaaacgaactgacggtagcgcgt
ttctttagtgagaccaacgcgccgcttccctgcgacgaagcgcagcttcgccagacactg
gacaggctgtttgactccggtgagcctacagactggcagaaagtggcggcggccgtcgcc
ctgacgcggcggatttcggtgatttcaggtggcccggggaccgggaaaaccacgaccgtc
gcaaagctgctggcagccctgatccagctatcaggcgagcagcgatgtcgtattcgtctg
gcggcgcccaccgggaaagcagcggcgcgactgaccgaatcactgggcggtgcgatgcaa
cagctgccgctcactcaggagcagcttgcgcttttcccgggtgaagcgagtaccctgcac
cgtctgctcggcgcgcagccgggtagccagcggctgcgctaccatgcgggtaatccgctg
catctggacgtgctggtggtggatgaagcctccatgattgacctgaccatgatgtcgcgc
ctgatcgatgctctgccgccgcatgcgcgcgtggttttcctgggcgatcgcgaccagctc
gcctccgtggaagccggggcggtactgggggatatctgtacctacgccagctacggttat
accgccgcgcgggcgcaggagcttgcccgcctgaccggctgctcgcttgaacccgatcac
tcgccggtcgcaggcgcactgcgtgacagcctgtgcctgctgcaaaaaagctaccgtttc
ggtagcaactccggcatcggccagctggctgcggcggtcaaccgtggcgatcggcatgcc
acgcgcacggtgtttgacggctctttcactgacattgaaaagaaatcgctgcaaagcggg
gaagagtatcaggctatgcttgaggaggctctccagggataccagcgttttctgagctgc
gtgcagcagcgcagtcagcccgggcaggtcattgccgcatttggcgaataccagcttctg
tgcgcattgcgggaagggccgttcggcgttgcgggcctgaacgacaggctggagcagctg
ctcgtgcagaaacgcaaaattaaccgtcagcagcattcgcgatggtatgaaggccggcca
gtgatgatctcccgcaacgacagtacgctggggctgttcaacggggatatcggtattgcg
ctcgatcgcggtaacggtttgcgcgtctggttccagctaccggacggcagcgtgaagtcc
gtccagcccagccgtctgccagagcatgaaacggcatgggcgatgacggtacacaagtct
cagggctcagagttcaaccatgcggcgctgatcctgccgacacagctttcgccggtcgta
acccgtgagttggtctacaccgccgttacccgtgcgcgccagcgtctgtcgctgtatgcg
gatgaacgcgtgctgggacaggcgattgccactcgcaccgagcgcagaagcggattaagc
gcgatttttgaatctgtctga
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