Enterobacter cloacae ECNIH5: ECNIH5_19225
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Entry
ECNIH5_19225 CDS
T03706
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecli
Enterobacter cloacae ECNIH5
Pathway
ecli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH5_19225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecli03019
]
ECNIH5_19225
03016 Transfer RNA biogenesis [BR:
ecli03016
]
ECNIH5_19225
Enzymes [BR:
ecli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECNIH5_19225
Messenger RNA biogenesis [BR:
ecli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECNIH5_19225
Transfer RNA biogenesis [BR:
ecli03016
]
Prokaryotic type
tRNA degradation factors
ECNIH5_19225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
PF0610-like_N
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AIX60771
LinkDB
All DBs
Position
complement(4072322..4074460)
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIQNINDLVKEAGKPRWDWQPEAVND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKDETIATLIAEDETLDANELSEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQQGE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcagcataccgtcacgctggaaacc
ggcatgatggctcgtcaggctactgctgccgtaatggtaagcatggatgacactgctgta
ttcgttaccgtagttggccagaaaaaagctaaaccaggtcaggacttcttcccactgacc
gtgaactaccaggagcgtacctacgctgccggtaaaatcccgggtggcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcgtcaatgaagtgcaggttatcgcaaccgttgtttccgtt
aacccacaggttaacccggacatcgtagcgatgatcggtgcgtctgctgccctgtcactg
tctggtatcccattcaatggcccaatcggtgccgcgcgcgtcggttacatcaacgaccag
tacgtgctgaacccaactcaggaagagctgaaagagagtaagctggacctggttgttgcc
ggtactgaagcagcggttctgatggttgaatctgaagcagaactgctgagtgaagaccag
atgctgggcgcagtggtcttcggccacgaccagcagcagattgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggtaaacgac
gcgctgaacgcacgcgtagctgcactggcagaatctcgtctgagcgatgcatatcgcatt
acagacaaacaggagcgttatgctcaggttgacgtgatcaaagatgaaaccatcgcaacc
ctgatcgcggaagacgaaacgctggacgctaacgagctgagcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagtcgcgtactggcaggcgagccgcgtattgatggccgtgaa
aaggacatgatccgtggtctggatgtgcgtactggcgtgctgccacgtactcacggttcc
gcgctgttcacccgtggtgaaacccaggcgctggttaccgctaccctgggtactgcacgt
gacgcacagaacatcgatgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactctgtgggcgagaccggtatggttggctcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgccagaagcagacaaa
ttcccgtacaccgtacgtgtcgtgtctgaaatcactgaatccaacggttcttcttccatg
gcttccgtgtgtggtgcctctctggcgctgatggatgcaggcgtgccgatcaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgttgttctgtctgac
attctgggtgacgaagatcacctgggtgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgccctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacattctgggcgtgatggaacaggct
atcaacgcaccacgcggtgatatctctgaattcgctccgcgtattcacaccatcaagatc
aatccagacaagatcaaagatgttatcggtaagggcggttctgttatccgtgcactgacc
gaagaaacgggcaccaccatcgaaatcgaagatgacggtactgtgaaaatcgcagcaacc
gacggtgagaaagcgaaatatgctatccgccgtatcgaagagattacagcagaaatcgaa
gtgggccgtatctacaatggtaaagtgacccgtatcgttgactttggtgcattcgttgcc
atcggtggcggtaaagaaggtctggtacatatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcaaatgggtcaggaagtaccggtgaaagttctggaagttgac
cgccagggccgtatccgtctgagcattaaagaagcaaccgagcagtctcagcctgctgcg
gcgccggaagctccggctgccgaacagcaaggcgagtaa
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