Enterobacter hormaechei NCTC 9394: ENC_02540
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Entry
ENC_02540 CDS
T02615
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eclo
Enterobacter hormaechei NCTC 9394
Pathway
eclo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eclo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ENC_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclo03400
]
ENC_02540
Enzymes [BR:
eclo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ENC_02540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ENC_02540
DNA repair and recombination proteins [BR:
eclo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ENC_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CBK84311
LinkDB
All DBs
Position
complement(266076..266885)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILTEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRACGTPIIATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagagaccagccgccgcggcattgagccccatctggttggc
gcgactattcttcatgctgtcgttcgcaacgggcgtctgcgctggccggtgtccgatgag
atccacgcgttaagcgacaaacccgtcctgagcgtgcagcgccgcgcgaaatacctgctg
ctggagctgcctgacggctggatcattatccatctgggcatgtcgggaagcctgcgcatc
ctcaccgaagagttgcctgcggaaaagcacgaccacgttgatctggtgatgagtaacggc
aaagtactgcgttacaccgacccgcgtcgctttggcgcatggctgtggaccaaagagctg
gaaggacacaacgtgctggcgcatctcggacctgagccgctgtcagaggcgtttaacgcg
gattatctcaaagagaagtgcgcgaaaaagaaaaccccgattaaaccctggctgatggat
aacaagctggtggtgggcgtgggaaatatctatgccagcgaatcgttgtttgccgccggg
atccatcccgatcggctggcctcctcgctgtcggcgcaggagtgcgagctgctggtcaga
gtaattaaagcggtactgctgcgctcaattgagcagggcgggacgacgctgaaggatttc
ctgcaaagcgacgggaagccgggctattttgcgcaggagttgcaggtttatggccgtaag
ggtgagccgtgcagagcctgcgggacgccgattattgccacgaagcacgctcagcgcgcc
acgttttactgccgtcagtgccagaagtag
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