Enterobacter hormaechei NCTC 9394: ENC_06930
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Entry
ENC_06930 CDS
T02615
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eclo
Enterobacter hormaechei NCTC 9394
Brite
KEGG Orthology (KO) [BR:
eclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eclo03016
]
ENC_06930
Enzymes [BR:
eclo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ENC_06930
Transfer RNA biogenesis [BR:
eclo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ENC_06930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Sfi1
Motif
Other DBs
NCBI-ProteinID:
CBK84677
LinkDB
All DBs
Position
722615..723769
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AA seq
384 aa
AA seq
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MGANKRESDLNYQMITTNDELASLCEVTREFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWAPMRELLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTARQLEYAAADVFYLLPIAGQLMKEAE
ASGWLSAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVEKAQQLPEDALP
EPLLNLMDMPGYRKAFKDIKALVQTVAGESKLSAELLASRRQINQLLNWHWKLKPQNGLP
ELVAGWRGELMAERLNTLLEGYSR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagagtccgatttgaattaccagatgatcactaccaacgacgag
ctggcttcgctgtgcgaggtgacgcgtgaatttcccgctatcgccctggatacggaattt
gtccgcacccgaacgtactatccgcagctgggtctgattcagatgtatgacggcaaacac
gtgtcgttgattgaccccctcggcattaccgactgggcgccaatgcgcgagctgttgctg
gataccgccgtgaccaaatatctgcacgcgggcagtgaagatctggaagtctttctcaac
acctttggcatcatgccgcagccgctgattgatacccagatcctcgcggcgttcagcggt
cgtccgctctcctggggcttcgccgcgatggtggaagagtacaccggtctgacgctggat
aagagcgaatcgcgtaccgactggctcgcgcgtccgctgacggcgcgtcagcttgaatac
gccgcggcagacgtcttttacctgctaccgattgccggccagctcatgaaagaggctgag
gcgtccggttggctgtctgccgcactggacgagtgccgcatgacgcagcagcgtcgtcag
gaagtggttgatccgaaagaagcctggcgtgacatcaccaacgcctggcagctgcgcacc
cgccagctggcctgtctgcaactgctggctgactggcgtctgcgtaaagcgcgtgagcgc
gatctggcggttaacttcgtggtgcgtgaagaacacctgtgggcggtggcgcgctatatg
ccgggcagccttggtgaactggacagcattggcctttccggaagtgagatccgtttccac
ggtaaaacgctgctcgcgctggtagagaaagctcagcagctgccagaggacgcactgcca
gaaccgctgcttaacctgatggatatgccgggctaccgcaaggcgttcaaagatatcaaa
gcgctggtgcagacggtggcgggggaaagcaaactgagtgccgaactgctggcttcacgt
cgtcagattaaccagctgctgaactggcactggaagttgaaaccgcaaaatggtttaccg
gaactggtcgccggatggcggggggaactgatggccgaacgcctgaataccctgctggaa
gggtattcgcgctaa
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