Epargyreus clarus: 140743014
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Entry
140743014 CDS
T11494
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
eclr Epargyreus clarus
Pathway
eclr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140743014 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eclr03009
]
140743014 (smid)
Ribosome biogenesis [BR:
eclr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140743014 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
AAA_28
nSTAND3
Vps4_C
RNA_helicase
NPHP3_N
AAA_17
AAA_18
AAA_2
ABC_tran
Mg_chelatase
IstB_IS21
AAA_7
TsaE
Parvo_NS1
ATPase
NB-ARC
AAA_11
Rad17
Zeta_toxin
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
140743014
NCBI-ProteinID:
XP_072930238
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MKKQHQTRQKTISDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDSAFCQ
LVESAYKVVLQSYGLDGASTSEGTEEESDLELLDENNSALNDRLLAMYKMQDKKRTAAAR
RPTDKSGEPIDIISSDEDGSAAPKLPKINDQITITPHIPNRNANSTSIEISKPKQNQHVP
ERKKKPDTNKMPVIIKKKIEIGTVKPVKVSFEDFGGISDVITQVCDLVLHMKHPEVYTEL
GMKCPRGALLHGPPGTGKTLLANAIAGKLQLPLIAVTGTELVGGVSGESEERIRELFERA
ITVAPCILFIDEIDAVCGNRIHAQKDMEKRMVSQLLASLDSLSDHNASILVLAATNNADA
LDPALRRAGRLEQEIALGIPSLKARKEILSILCKKLTLSEDVDMSALAQITPGFVGADLL
ALVNKASTYAIKRIFSELQVLTQVEPVKTVSDSPKTDEKENVIPNGDKESEETSVTKEAG
DTTETVATEPPTNTETTTEQNTEIPIIEDIKNTNIEINSKPIDPVDEVLHLLEDNLPYTS
EELSGLSVKQDDFIKALKTTKPSAVREGIVTVPDVTWDDVGSLSQVRKELQLAVLAPVKY
PEQLKKLGLTSPSGVLLCGPPGCGKTLLAKAVANEAGVNFISVKGPELLNMYVGESERAV
RTCFRRARNSAPCVIFFDEFDALCPRRSSHDNNGAARVVNQLLTEMDGIEDREGVFVLAA
SNRPDIIDPAVLRPGRLDRIMYVGMPGRDDRYDILQKLTKGGTRPQLGPDADLHVIAGIT
EGYTGADLSGLVRAAATNALTNHIANGTLEGDLFVTFEDFRTALTKCKPSVSAKEQIHYE
KLRIKYIGGLDEKDMEMETEPTNEESMDTV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaacatcaaaccagacaaaagactataagtgacccggttattgtttcgcgt
gtgaaaaattacctcgcggagaacgtcgacaagacgtttgtcgatgtcagccaaatggcg
cgttctctcaaagagcgctatcgggagtacaacaacaggagcgatagcgctttctgtcag
ttggttgaaagtgcgtacaaggtggtgttgcagagttacgggctcgacggcgcatctaca
tcggagggaacggaagaagaatccgatttagagttgttagacgaaaacaacagcgcgttg
aacgaccgcctgcttgcaatgtataagatgcaggataagaaacgtactgcggccgcccgc
cggccgaccgacaaatccggcgagccgatcgacatcattagcagcgatgaagatggcagc
gccgcgcccaagctgcccaaaatcaacgaccagatcaccataaccccccacataccgaat
cgaaacgcgaacagtacatcgatagaaatttcgaaaccaaaacaaaatcaacacgttcca
gagagaaagaagaaaccagatacaaataagatgccagtaataattaagaaaaagatcgaa
atcggaaccgtgaagcctgtcaaggtcagtttcgaggattttggtggcatatctgacgtt
attacacaagtatgtgatttggtgttgcacatgaaacacccggaagtgtatacagaattg
ggcatgaagtgtcccagaggggcattgctgcatggacctccaggtacaggaaagacttta
ttggcaaatgcaattgcaggcaagttgcagctgcctctcatagccgtaactggtactgag
ttagtaggtggagtatctggagagtcagaggaacgtatcagggagttgtttgaacgagcc
ataactgtggcaccttgcattttgtttatagatgagattgatgctgtgtgcggcaaccga
atccatgcccaaaaagacatggagaagaggatggtgtctcagttattagcaagcttagat
agtttgagtgatcataatgcgtcgattcttgttttagcagccactaataatgcagacgca
ttggatccagcgttacggcgcgcaggtcgcttggaacaggaaattgctctaggcattcca
tctttaaaagcgaggaaagaaatcttatcaatactttgtaagaaattgactttaagcgag
gatgtagatatgagtgctttagctcaaattactccaggttttgtgggagctgacttgtta
gcgctcgtaaataaagcaagtacatatgctatcaaaagaatatttagtgagcttcaggtc
ttaacacaggtggaaccagtgaaaaccgtttctgacagtcctaaaacagatgaaaaagaa
aatgttataccaaatggagacaaagagagtgaggagacatccgtaacaaaagaagctggt
gacactacagaaactgtggcaactgaaccaccgacaaatacagaaacaacaacagaacaa
aatacagaaattccaataattgaagatataaagaacacaaatattgaaataaacagtaag
ccaatagatcctgtagatgaggtgttacatcttttggaagataatctgccttacacatca
gaggagctgtctggcctttcagtaaaacaagacgactttatcaaagctcttaaaacaaca
aaaccatctgctgttcgagaaggtattgtcacagtgccagatgtaacatgggatgatgtg
ggatcgcttagccaagttcgcaaagaacttcaattagcagtcctagcacctgtgaaatat
cctgaacaactcaagaagcttggtttaacttctcccagtggtgttttgctatgtgggcca
cctggttgtggtaaaactttactagctaaagctgtggccaatgaggctggggttaacttt
atatctgttaaagggccagagcttttaaatatgtatgtgggcgagagtgaacgagcagtc
agaacgtgtttcaggcgagcgaggaattctgcgccttgcgttatattctttgatgaattc
gacgcgctttgcccgagacgtagctcgcacgacaacaatggagcagcgagagttgttaac
cagctactgacagaaatggatggcattgaagatcgtgaaggggtgttcgtgttagcggcg
tcgaatcgaccggatataattgacccggcagtactgcgaccaggacgtttggaccgcatt
atgtacgtcggaatgccgggtagagatgatagatacgacatactacaaaagttaactaag
ggtggtacaagaccccagttaggacctgatgcagatttgcatgtgattgctgggataact
gaaggttacactggagcagatctttccggattagtgagggcagccgcaacaaatgcctta
actaatcacattgcaaatggtacactagagggtgacctatttgttacatttgaagacttc
agaacagcgctcactaaatgcaagccatcagtttcagcaaaagagcaaattcactatgag
aaattgcgaatcaaatatattggaggactagatgagaaggatatggaaatggagactgaa
ccgacaaatgaggaatcaatggacacagtatga
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