Epargyreus clarus: 140743413
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Entry
140743413 CDS
T11494
Name
(RefSeq) superkiller complex protein 3-like
KO
K12600
superkiller protein 3
Organism
eclr Epargyreus clarus
Pathway
eclr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140743413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140743413
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140743413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_19
TPR_8
TPR_1
TPR_12
TPR_CcmH_CycH
TPR_16
CFAP70_TPR_C
ANAPC3
TPR_11
ARM_TT21_C
TPR_21
TPR_17
PRP6_TPR
DUF7017
FAT
Prolamin_like
TTC22_N
Motif
Other DBs
NCBI-GeneID:
140743413
NCBI-ProteinID:
XP_072930756
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MKFFNRRTRPPPKEKVPDNKTLLRFARQYIDGKNMQEAQKCCKKVLKKDSQCYMALVLYG
KSLGTSEEALNMYKRAIDIKPDNPLAWQGLAKYYETKDDEQSKNQLFEIYRNILNLRIDD
DYAIKTINKQGTLGCLMKHSETISTLIEYMGVQRDECIMKTAEKQFLALLVSKVPIKIED
ITNTTNMLKKINNTDSRNNVSMILLGKCILKTNEFANAVQQIIELEFFPESTMMKEWLCK
VLCKIFIEKDDFYNFDIDNYINVLTTGVEDTIYGGTLLAIMDYRVQNYEEALRKCSLVVD
DSEDTDIPEALFMLNCSRMIKNVSMTESLIQSFLTKEKLKQPEFLVTMNKIMLSCYIESN
RPHEALICLNKIPIDEMDSAVLIDIANMYCEADAHGVRFDNILFGSDYLDLFKFLAYMRV
EQYDQAIAVLRRYDKHPVKYYLLAQVYWQTEMFAHCLQSLQFALEFLPNHPKVYYSLGIY
YYDHERNIYRSIQCFEKAYSICSTDIEVIRMLSVAYDQNLLRDTEYNLLETAVNSTETKK
FWMCARLGRLCFLKGNMDDALIYLQEAIHLNRYDLTAYEWMGDVYYNTKAYDLALNAYEK
VMDLSTDISLLVNCLSRIGSTYSRQTYYDKAIFIFERILHLIPDSIEALKGLTQNHILNA
QKKSSNYLFSEARDELQMALNTITIIMTSGVTNLIYLHFYGDVLVSLTRLPKFFSYVRTR
NPEGESRINKLGLYEMAIATYADIAKTRDTYALFKCAHTYLEYYVETKRASLLHASYNLS
VLSIKAKPDSWRYWDLLGKVCYFLHKSDVAHYSFFKAIILNGDISAFKVWCNLGTLYLKI
NKDRLANYCFAVGKKCLPSYPSAWIGDGLLAEIIREDGNVGMFAPNPDSNEFEELTDLDF
LDWVTAIHELSIPPTEPSFDMALDAFFIVPNRMDIIEWYLTFEQHTGWGCICLGLIQEYR
GQINEATALYNKAYSLAEGDFKKETILHMSRLLMKRHNYDEAIKLYGDVDQVNLEATTAL
AKALYEEASYKESYIAYNKALNDLCQNDDDLVNVLIPMSNVAFKLNGCADAVRFVHRAAE
ITSPPMQTHVFNLSFLKTYAFGKIHVDIIAYIMSQHMHFYVDDGMWWYYMGLNYLSGDSG
FAKIASLCIQRAIDVSLDTEYSREIGKMHAMISIAEFYSGDREEAMAYAKQALNIYPDQP
ELWAALILCVFSHRQWPQRKSWIERALSRVRQNITLPRSISEWLDNLEEKLRRE
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttcaatcggcgaacaaggcctccgcctaaggaaaaagtccccgacaacaag
accctattaagatttgccagacagtacatagatggaaaaaatatgcaagaggctcagaaa
tgctgcaaaaaagtacttaagaaagatagccagtgctatatggcactcgtactatacgga
aaatcattgggaacgtctgaagaagctcttaacatgtataaaagagcaatagatattaaa
ccagataatccattagcttggcaaggtcttgctaaatactacgaaacaaaagatgatgaa
cagtctaaaaaccaactatttgaaatttatcgaaacattttaaatttgcgtattgatgat
gactatgctataaaaacaataaacaaacaaggcacattgggttgcctaatgaaacatagt
gaaactataagtacccttatagagtatatgggtgtacaacgcgatgaatgtataatgaag
acagctgaaaagcaatttttagcattgttagtctcaaaagtccccattaagattgaagat
attaccaataccacaaacatgttaaagaaaattaataatacagattcgagaaacaacgta
agcatgatacttttaggaaaatgtattttgaaaacaaacgaatttgcgaacgcagtacaa
caaataattgaattagaattctttcctgaaagcacaatgatgaaagaatggttgtgtaaa
gtactatgcaaaatatttatagaaaaagatgacttttacaactttgatattgacaattat
ataaatgtactgacaactggagttgaagacacaatatatggagggaccctgttggcaata
atggactacagggtacagaattacgaggaagcactacggaaatgctctcttgtagttgac
gattctgaggatacagacatccctgaagctctatttatgttaaattgttcaaggatgatc
aaaaatgtttcaatgacagaaagtcttattcagtcatttttgactaaagaaaagcttaaa
cagccagagtttcttgtaacgatgaataaaatcatgttatcatgttacattgagagtaat
agacctcatgaagcactcatttgtctaaataaaattcccatagatgaaatggattccgct
gttttgattgatattgcgaatatgtattgtgaagcagatgcccatggcgtaagatttgac
aacatcttattcggatcggattatcttgatttattcaaatttctagcttatatgagagtg
gaacaatatgatcaagctattgcagttttacgtagatatgataaacatccggtgaaatat
tatttacttgcacaggtatattggcaaacagaaatgttcgcccattgtctacagagcttg
caatttgcattggaattccttccaaatcatcctaaagtatattacagtttaggtatatac
tactatgaccacgaaagaaatatatatagaagtatacaatgttttgaaaaagcttacagc
atatgtagtacagatattgaagtaatacgaatgttaagcgtagcctatgaccaaaatctc
ttaagagacacagaatacaacttattagagacagctgttaactcaacggaaaccaaaaaa
ttttggatgtgtgcaagactagggcgtttgtgctttttgaaaggcaacatggacgacgct
cttatttatttgcaagaagccattcatctgaaccggtacgaccttactgcctatgagtgg
atgggagatgtctattataatacgaaagcgtacgatctagcgcttaacgcgtatgaaaaa
gttatggaccttagtaccgatatatcactcctggtcaattgtcttagcaggataggatca
acatactctcgccaaacatattacgataaggcgatttttattttcgaaagaattctacat
cttatcccagatagtatcgaagccttaaaaggccttacacaaaatcacatcttgaacgcg
caaaaaaaatcatcaaactatttatttagtgaggcaagagacgaattacaaatggcttta
aataccatcactataatcatgacaagtggtgtgacaaatttgatttatttgcatttctat
ggagatgttctagtatccctaacaagactgccgaaatttttcagttacgttcgaacccgc
aatccagagggtgaatcacgtataaataaattaggtttatacgaaatggcgatagcaacc
tatgcagatatagcaaagacaagagacacatatgccttgtttaagtgtgctcatacgtat
cttgaatattacgttgaaacaaagcgagcttcacttttgcacgcatcatataatctatct
gtacttagcataaaagctaaacctgattcatggcgttattgggatttactcggaaaagtg
tgctattttttgcacaaatctgacgttgctcattacagcttttttaaagcaattatatta
aatggcgacatatctgcgtttaaggtatggtgcaatcttggaacgttatatttaaaaatc
aataaagatcgattggcaaactattgttttgcagtaggcaagaaatgtctaccatcttat
ccttcagcttggatcggagacggattgttagctgaaattatccgtgaggatggaaacgtg
ggcatgtttgcccctaatcccgactcaaacgaatttgaagaactaactgaccttgacttc
ttagattgggtcaccgctatccatgaattatccattccaccaacagagccatcctttgac
atggctcttgatgcattttttattgttcctaatcggatggatataatagaatggtactta
acatttgagcaacatacaggttggggttgcatttgtttaggtttaatacaagaatatcga
ggacaaataaatgaagcgactgcattatataataaagcatattcactggcagaaggtgac
tttaaaaaggagacaatacttcacatgtctcgacttctaatgaaacggcataattatgat
gaagcaataaagttgtacggtgatgtcgatcaagtaaacttagaagcgaccactgcattg
gctaaggctctttacgaagaagcaagttataaagagtcatacatcgcctacaataaagct
ttaaatgatttgtgtcaaaatgacgatgatctagtaaatgtgctaatcccaatgagcaat
gtagcatttaaattaaatggatgtgctgatgcagtaagatttgtgcatagagcagcggaa
ataacatcccccccaatgcagactcatgtttttaatctctcattcctaaaaacatatgct
ttcggcaaaatacatgtggatataatcgcgtacattatgtcgcaacatatgcacttctac
gtcgacgatggcatgtggtggtactacatgggtctaaattacctaagcggtgacagtgga
tttgctaaaattgcaagtttgtgtattcaaagagccattgacgtatcgttggacacagaa
tattcgcgtgagataggaaaaatgcacgctatgatcagtattgcagaattttattcaggc
gatagagaagaagcaatggcgtacgccaaacaagcattaaatatatatccggaccaacca
gagctctgggctgcgttgatattgtgtgtgttttctcacagacaatggcctcaaagaaaa
tcttggatagaaagggcattatctcgagtacgccaaaacatcactttaccccgatcaatc
agcgaatggctagataacttggaagaaaagcttaggcgtgaataa
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