KEGG   Epargyreus clarus: 140744584
Entry
140744584         CDS       T11494                                 
Symbol
lt
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
eclr  Epargyreus clarus
Pathway
eclr04140  Autophagy - animal
eclr04142  Lysosome biogenesis
eclr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:eclr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    140744584 (lt)
   04140 Autophagy - animal
    140744584 (lt)
   04148 Efferocytosis
    140744584 (lt)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eclr04131]
    140744584 (lt)
Membrane trafficking [BR:eclr04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    140744584 (lt)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin zf-RING_Vps41 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_VPS8 Beta-prop_WDR5 Beta-prop_WDR3_1st zf_RING_Vps8_fungal Beta-prop_HPS5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 TPR_7 Vps39_1 TPR_2 TPR_YpiA Beta-prop_EML_2
Other DBs
NCBI-GeneID: 140744584
NCBI-ProteinID: XP_072932333
LinkDB
Position
Unknown
AA seq 849 aa
MLLPDVRIREMALNVESCDSLSPDEEPKLKYDRMGNDVQNILLNDAVSCICVHTKFICLG
TQWGVIHLLDHEGNTVPISQEKNQRDLQAHAIAVNKISVDLNGDYIASCSDDGKVLVYGL
YSDDNTHNLILGRVVKSVALDPHYFKSGSGRRFLTGDNKLTLYEKTFLNRLRSTVLCECE
GYVQAMAWHDRFVAWACEVGVRVYDLVARCSLGLIQWEKSPNRSIEDYRCNLLWSAPKTL
MIGWVDTIRICVIRKRSQIELQTRDVTEYLVDPVHTFQTDYYISGLGPLDDQLVLLGVPK
ECDAETGKAQRPVLSVADYKDCEFCEVSTDSLSVRGYEEYSCNDYYLDMLIEESRFFIVS
PKDIIVAGPYDIDDRVNWLTEHGRFEKAMAVLEEIGGKTSKHSVVTVGVQYLDHLLSEQL
FEEAAILCARICKNDKVLWEKQIMKFDNVKQLRAISSYVPRNPDQALSSHIYELIFYEYL
RVDPQGFLKLVTEWDPALYKTGVIVKKVLEHLLTTKVDQNIYLEALALLYCYQKKYDKAL
TTYLKLQHKDVFSIITKHDMHSVIYDKILDLMNLDCDKAISVLLDKKKVPVEVVEKQLEN
HDLYLFKYLDAYSKIEPTGRYHGKLVRLYAKYARQNLLPFLKCSDNYPIQEALDVCQSNE
FYPEMVFLLGRIGNTREALQIIIEKLDDINQAINFCQEHNDKELWTDLIKQTVDKPECVT
LLLKRIGNYVDPRMLIQNIQSGCEIKDLKESLAKMMCDYYLQLSVQEACKVITLRNYFDL
HEKLIIGQQRGISVTDEFLCCVCQRRIIIKDLSNASDLIVYNCRHSFHIECLPDRVECAS
CCVCSAVKM
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgttattgccggacgttcgaattagagagatggcactgaacgtggaaagttgcgatagc
ctttcgcccgacgaggagcccaagttgaaatacgacagaatggggaacgacgttcaaaac
attttgctgaacgacgcagtgagttgtatttgcgtgcacacgaagtttatttgcctgggc
acgcagtggggcgtcatccacctgctggaccacgagggaaacacggtgccgatatcgcaa
gagaagaatcagagagacctgcaggcccatgcgatcgcagtcaacaagatctctgtggac
ttgaacggagactacatcgccagctgctcggacgacgggaaggtgctggtgtacggccta
tactccgacgacaacacccacaacttgatcctggggagagtggtcaagtctgttgcttta
gatccccactacttcaaatctggctctggtagacgattcctaacaggtgacaacaagctg
acactatacgagaagactttcctgaaccgtttgcgaagcactgtgctatgtgaatgtgaa
gggtacgttcaggccatggcctggcacgaccgattcgtagcctgggcctgcgaagtcggg
gtacgcgtctacgatctcgtggcgagatgttccctcggtctaattcagtgggaaaaaagt
ccaaacaggtccattgaagattatcgctgcaatctactatggtcagctcctaaaacactc
atgatcggatgggttgacactattcgaatatgcgttatacgtaaacgaagccaaattgaa
ctgcaaacccgagatgttactgaatatcttgtcgatccggtacacacttttcaaactgac
tattacatcagtggacttgggccacttgacgatcagcttgtattactcggcgtaccaaag
gaatgcgatgctgagacaggaaaggcgcaaagacccgtgctctctgtcgccgattacaaa
gactgtgaattttgtgaagtttcaactgatagtttaagtgttcgcggctacgaagaatat
tcctgcaatgattattatttagatatgctcatagaggagagtaggttctttatagtttct
ccaaaagacattatcgttgctggtccttacgacatcgacgacagagtgaactggctcact
gaacatggacgattcgaaaaggccatggcggtgttggaggaaatcggtggaaagacttca
aaacattctgtagtaactgttggtgtgcaatatttagatcatttgttatctgaacaacta
tttgaggaagccgctatattgtgtgcaaggatatgcaagaatgataaagtattatgggaa
aaacaaattatgaagtttgacaatgttaaacagctcagagcaatcagttcgtatgttccc
cgaaacccggaccaagccttaagttcgcacatctacgaattaatattttacgaatacctg
agagtagatcctcagggatttttaaaattggttacggagtgggatccggctctttacaaa
acaggagttatagtcaaaaaagttttggaacacttattaacaacaaaagttgaccaaaat
atatacttggaagctttggcactcctctactgttatcagaaaaagtacgataaagcgttg
actacgtatttaaaacttcaacacaaagacgtattctcaataatcacgaaacacgacatg
cactcagtaatatatgacaaaatcctagacttaatgaatctggactgtgataaggctatt
tcagtgctccttgataaaaagaaagttccggtagaggttgtcgaaaagcaattagaaaat
catgacttatatctcttcaagtatttagacgcatacagcaaaatcgaacctactgggcgt
taccacggaaagcttgttagactttacgcgaagtacgcgagacaaaatctcttgccattc
ttaaaatgtagcgacaattacccaatacaagaagcccttgacgtgtgtcaaagcaacgaa
ttttatcctgagatggtgttcctccttgggcgtataggtaatacacgagaagccctccaa
atcataatagaaaagctagacgacattaaccaagcgatcaacttttgtcaggagcacaat
gacaaggaactctggaccgatctcattaaacaaacggtagacaaacccgaatgcgtcacg
cttcttctcaaacgtattggcaactatgtggacccgcggatgttgatccagaacatccag
tcggggtgcgagataaaagatctgaaggagtcactagcgaaaatgatgtgcgattactat
ctacaactgtcggttcaggaagcttgtaaagtgataactctacgaaattatttcgatttg
cacgaaaagttgatcataggacaacagcgcggcatatcagtgacggacgaatttttgtgc
tgtgtttgtcaaaggcggatcataataaaggacctttccaatgcatccgacctaatagtg
tacaactgtagacattcgtttcacatagagtgcctgccggacagagtggagtgcgccagc
tgttgcgtctgtagcgctgtaaaaatgtga

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