Epargyreus clarus: 140746030
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Entry
140746030 CDS
T11494
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
eclr Epargyreus clarus
Pathway
eclr03013
Nucleocytoplasmic transport
eclr03015
mRNA surveillance pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140746030 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
140746030 (Hel25E)
03015 mRNA surveillance pathway
140746030 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140746030 (Hel25E)
03041 Spliceosome [BR:
eclr03041
]
140746030 (Hel25E)
Enzymes [BR:
eclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140746030 (Hel25E)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140746030 (Hel25E)
Spliceosome [BR:
eclr03041
]
Complex C
Other components
EJC/TREX
140746030 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140746030 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140746030
NCBI-ProteinID:
XP_072934110
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGASEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMPGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNN
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRSMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDEGDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgacgatcttctggactacgaagatgaggagcaggcagatcagcagacc
gcggacggagcgtcggaggcggcgccaaaaaaagaggttaagggatcctacgtatccatt
cacagttcgggcttccgagacttcttgttgaagccggagatactgcgggcgatagttgac
tgcggtttcgagcatccgtcggaagtgcaacacgaatgtattccccaagcggtgctcggt
atggatattttgtgtcaagcgaagtccggtatgggcaagacggccgtgttcgtgttagcg
acgcttcagcagttggagccctccgagaatcacgtctatgtgctcgtaatgtgccacacc
agagagctggcgttccaaattagcaaggaatacgaacgcttctcgaaatacatgcctggt
gtgagggtgtcggtgttcttcggcggtatgcctatacagaaagacgaggaagtacttaag
accgcctgcccccacatcgtagtgggcacaccgggccggatacttgcattagtcaataac
aagaagctgaaccttaagcatctgaaacacttcattctggacgagtgtgacaagatgctg
gagtccttggacatgaggcgggacgttcaggagatattccggaacacaccacacggtaaa
caagttatgatgttctccgccaccttgagcaaggaaattcgacctgtatgtaagaagttc
atgcaggaccccatggaagtatacgtagatgacgaggcgaaactcaccttgcatggtctg
cagcagcactatgttaaacttaaggaaaatgagaagaacaagaaactctttgagcttcta
gatgtactagagtttaaccaagtagtaatatttgtgaagtcggtgcagcggtgcatagca
ctggcacagctgctcactgaccagaacttccccgcgattggcattcaccgcagcatgacc
caggacgagcgcctgtcccgttaccagcagttcaaggatttccagaagcgtattctagtt
gcgacaaacttgtttggaagaggaatggatattgaaagagtgaacattgtcttcaattac
gatatgccggaggattccgacacgtacctgcatcgtgtggcccgcgccggccgctttggt
accaaaggattagcaataaccatggtatctgacgagggagatgccaaaattctcaacgaa
gtacaagatcgattcgatgtcaacattaccgagttgcctgaagagattgaattgtcaact
tatatagaagggcgatag
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