Epargyreus clarus: 140747209
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Entry
140747209 CDS
T11494
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
eclr Epargyreus clarus
Pathway
eclr03030
DNA replication
eclr03410
Base excision repair
eclr03420
Nucleotide excision repair
eclr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140747209 (Gnf1)
03410 Base excision repair
140747209 (Gnf1)
03420 Nucleotide excision repair
140747209 (Gnf1)
03430 Mismatch repair
140747209 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eclr03032
]
140747209 (Gnf1)
03400 DNA repair and recombination proteins [BR:
eclr03400
]
140747209 (Gnf1)
DNA replication proteins [BR:
eclr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140747209 (Gnf1)
DNA repair and recombination proteins [BR:
eclr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140747209 (Gnf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_14
AAA_5
AAA_16
AAA_33
RNA_helicase
AAA_18
AAA_19
RuvB_N
NTPase_1
AAA_17
BRCT_2
RCF1-5-like_lid
AAA_6
AAA_11
Motif
Other DBs
NCBI-GeneID:
140747209
NCBI-ProteinID:
XP_072935597
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MSKDIRSYFLCKKLQKPKEEDDDVIPESPDVQIKNKKKESRKRRVIQDDSDEEIFATKKK
PSSSDSNKTSKNKPKSPQKKIFKEVKATDLFGGPIKRTEPLVTKAKKKNTELGIHSDDEF
DKSLLELDVNNDIEKVEQKQVESKDFSKTIKKEKQSPNKKSESSNSVHIEKEPNNEEFSP
NHSDKNDNNVTNTDTEITKTESHKKIKKEASKDETGLKRDFSEFIDDSVTDNQTHDEQPK
NKKRKLNKSLNDSVLTDEERHERRLHSAALYQKYLNRSGPKHLGSKEIPEGAPNCLKDCA
FLLTGVLDSFERDEVIAAIAKYGGSIKNSISRKVTHVLAGDEAGPAKLAKAQDLGIKIIN
EDEFLEIIKKSSGKPSNNSIDNRKEVKKNKTPESKNSTKEHKIRNSIDKKVHSNNRVVDE
EENSSDRKTKLTNGDVKDRKDREDKNKDSVKKVSPKDKLKTETTVKSEPSDKSVKKEIEQ
SKTNNETSPNKSALSSSLMWVDKYKPQNLKQIIGQHGEASNVKKLCNWLTKWYVNRKAKL
PKPSPWAKNDDGGYYKAALLSGPPGVGKTTTVSLVCKELGFDMVEFNASDTRSKTLIKEQ
IGELLTTTSLSAYAKGDTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELIALIKTTSVPI
ICMCNDRNSQKMRSLVNYCYDLRFTRPRVDQIKSAMLSICFKEGVKVPPDVVAQLAVAAG
QDVRQTLHMLSVWAADSSLADADRLRDEARRVRKDIKMGPWEAIRKVFSAEDHKTMSLND
KSDLFFSDYSLAPLFVQENYLSVVPHCDKKELLHRMSEAADSISLGDIVDARIRGSQAWS
LLPIQAMYSSVIPGHHLSGHIGGQIQFPGWLGKNSRATKMHRLCQEIHAHTRLSTSGSKS
SIYLDYAPYLRDAILNPLIKERSDGIPKSLEVLESYHLLREDLDSLTELSLWPGQRNPNI
LVDAKVKAAMTRTYNKASTARPYAPPAARRARTHEHDDDDDNDDDYGDDEHDDDPEKDAL
IKKKKSKETEKAGSSKEKASSSKEKATTSKKKKK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggacataagatcatactttctttgcaaaaaactccagaaacctaaagaagaa
gacgatgatgttataccagaatcacctgatgtacaaataaagaataagaaaaaagaatca
aggaaaagaagagtaattcaagatgattcagacgaagaaatatttgccactaaaaagaag
ccatcaagtagtgattctaataaaacatcgaaaaacaaaccaaaatcaccacaaaagaaa
attttcaaggaggtgaaagctacagacttgtttggtggtcccatcaagaggacagagcct
ctagtgaccaaagcaaagaagaaaaatacagaacttggcatacattcagatgacgaattt
gataaaagtttactggaattagatgtgaacaatgacattgaaaaagttgagcagaaacag
gttgaatcaaaagattttagtaaaacaattaaaaaggaaaaacagtctccaaataaaaaa
tctgaatccagtaactcagtacatatagaaaaagaacccaataatgaagaattttcacca
aatcattcagataaaaatgacaataatgttacaaatactgatacagaaataacaaaaaca
gaaagtcataagaaaattaaaaaggaagcatctaaagatgaaacaggtttgaaaagggat
ttcagtgagtttattgatgacagtgttactgacaatcagactcatgatgaacagccgaaa
aacaagaaacggaaacttaacaaaagtctcaatgattctgtccttacagatgaagaaagg
catgaaagaaggttgcattcagctgctttatatcagaaatacctgaacaggtctggacct
aagcatttgggatcgaaggaaatccctgagggtgcacccaactgtttgaaagattgtgcc
ttccttctaaccggggtcctagactccttcgagagggatgaagtcatagcagcaattgcg
aaatacggcggttctatcaagaactctatcagcagaaaggtaacacacgtgctcgctggc
gacgaggccggtcccgctaaactcgcaaaagcccaagatctcggcatcaaaatcattaac
gaggatgagttcttagaaatcattaaaaaatcgtccggaaaaccaagtaacaatagcata
gacaataggaaggaagttaaaaaaaataaaactccagaatcaaagaacagtacgaaagaa
cataaaattagaaatagtattgacaaaaaagtacatagtaacaatagggtagttgatgaa
gaagaaaattctagtgatcggaaaactaaattaactaatggtgacgtaaaagatagaaaa
gacagagaggataaaaataaagatagtgttaagaaagtttcgccaaaagataagttgaag
acagagactacagtcaaatcggaacctagtgataaatcagtgaaaaaagaaattgaacaa
tcaaagacaaataatgagacaagtccgaataaatcagcattatcgagttccttgatgtgg
gtagacaaatacaagccacagaatctgaaacagataattggacaacacggcgaggccagc
aatgtgaagaagttatgcaactggttgaccaaatggtacgtgaatagaaaggcgaagttg
cctaagcccagcccctgggccaagaacgacgatggagggtactacaaggccgctttactt
tctggaccacctggtgtaggtaaaacgacgacagtgtcgctggtgtgcaaggaactgggc
ttcgacatggtggagttcaacgcatctgacacgaggagcaagacgctcatcaaggagcag
atcggggaactgctcaccaccacatcactctctgcgtatgctaaaggtgacactggaaag
caagcggtgacaaagaagcacgtactggttatggatgaagtcgatggaatggccggcaac
gaagacagaggtggcctccaagagttgatagcactgataaagacgacgtcggtgccgata
atatgcatgtgcaacgacaggaacagccagaagatgcgctcgctcgtcaactactgctac
gacctgcggtttactaggcctagagtcgaccagattaagtcggcgatgctgtcgatatgc
ttcaaggagggcgtgaaggtcccgccggacgtggtggcgcagctggccgtggcggccggc
caggacgtgcgccagacgctgcacatgctgtccgtgtgggccgccgacagctcgctggcc
gacgcggaccgcctgcgggacgaggcgaggcgcgtcaggaaggacattaagatgggccct
tgggaggcgatccggaaggtattctccgccgaggaccacaagacgatgtcgctcaacgac
aagagcgacctgttctttagcgactacagcctcgcgccgctgttcgtgcaggagaactac
ttgtcggtggtgccgcactgtgacaagaaggaattattgcaccgcatgagcgaagcagcg
gacagcatcagcctcggcgacatcgtggacgctcgcatacggggcagccaggcgtggagt
cttttacctattcaagcgatgtacagctcggtgatccccggtcaccacctatcgggccac
attggcggccagatccagttccccggctggctcggcaagaactcgcgcgcgaccaagatg
caccggctctgccaggagattcacgctcacactaggcttagcacatccggatcaaagtcg
tcaatatacctggactatgcgccttacttacgcgacgcaatcctcaacccccttataaaa
gagaggtcggatggcatacccaagtctctggaggtgttggagtcctaccacttgctgagg
gaggacctggactcgcttacggaactgtcgttatggccgggccaaaggaaccctaacata
ttggtcgatgctaaggtgaaagcagcgatgacgcgtacatacaacaaggcgtcgaccgcg
cggccgtacgcgccgcccgccgcgcgccgcgcccgcacacacgaacacgacgacgacgac
gacaacgacgacgactacggcgacgacgaacacgacgacgatccggagaaggatgcactt
attaaaaaaaagaaaagcaaagagacagaaaaggcaggatccagtaaagaaaaggcaagt
tcgagcaaagaaaaggcaaccacaagcaaaaaaaagaagaagtga
DBGET
integrated database retrieval system
