Epargyreus clarus: 140747832
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Entry
140747832 CDS
T11494
Symbol
Col4a1
Name
(RefSeq) uncharacterized protein Col4a1
KO
K06237
collagen type IV alpha
Organism
eclr Epargyreus clarus
Pathway
eclr04382
Cornified envelope formation
eclr04512
ECM-receptor interaction
eclr04518
Integrin signaling
eclr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140747832 (Col4a1)
04518 Integrin signaling
140747832 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140747832 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140747832 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eclr04147
]
140747832 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
eclr00536
]
140747832 (Col4a1)
Exosome [BR:
eclr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
140747832 (Col4a1)
Glycosaminoglycan binding proteins [BR:
eclr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140747832 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
140747832
NCBI-ProteinID:
XP_072936552
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MAVNELWLVAALALLAVVNSQENYGRGDMGDNNNILYTDDNEFYMQNVPEAPPPQNTYGL
YARQDYPAPVPPPRPQPNIGLNFAVYDPVTRQRTTQFDRNCTAPGCCVPKCFAEKGNRGI
PGSPGPQGLRGLPGHEGIEGPQGPKGQKGQIGPQGPRGPSGERGKPGAQGFIGLSGPPGV
QGNPGLPGIPGRDGCNGTDGEPGPQGPQGMQGPRGFPGPKGDKGDKGEAAHTGRYPDKGQ
KGEPGLDGMQGIQGPVGPTGPPGLQGPRGSTGPMGPQGAKGDKGSKGVKGLSIQGDKGER
GDRGHKGPSCPDVILPSLDNKGAIKGVKGNMGHKGEKGEPGNQGIKGDMGNTGEPGLPGQ
PGDKGEKGIRGNPGERGRDGMYGPPGPMGPKGDRGYDGISGLPGRPGSKGEPGKDGTPGL
RGLRGVPGAPGGRAGARGPPGPPGPRGYQGPSGAPGTAGKPGDRGQTGPMGPPGGQGEPG
TPGREGPAGVKGEKGEPGLEGAKGEIGPRGYDGPTGPQGPRGAKGENGLTIPGEKGSAGL
PGRFGDKGQKGEKGYTGLRGSPGNSTRGTPGMPGEMGPPGDKGDKGSPGFDGIPGNPGAK
GDIGGRCNECWPGSQGMKGDRGSDGTPGEQGDRGPPGPTGVPGERGADGLNGFPGSPGAP
GDRGEDGPIGPPGEPGKDAMIPSNLIQGKKGDKGSQGEKGRMGPKGERGSDGLKGDRGLS
GMPGLKGDEGRMGPPGIDGIPGNDGIPGVPGRNGLSIKGEKGVPGDFGQKGDKGFPGRLG
IKGEPGQCPANLQALTKGDKGFTGAPGPEGPQGDKGDKGDRGYPGKTGDKGEMGLPGAQG
AVGPRGFLGQKGDKGETGSMGFPGTTGEVGARGLPGPPGIKGDKGEIGPSMPGPQGLPGM
RGLKGETGLRGIPGTPGNDGPPGPIGLQGEKGDRGYTGSQGPTGPPGPKGDDGPVGPPGV
PGIPGTPGRQGQKGQQGYPGLYGKPGVIGLPGYKGEPGIQGPDGPKGFPGPRGRSGLPGN
VGIDGTPGAKGDKGQIGNPGLPGQSGFDGPPGPKGEAGMKGDQGYPSPPGPPGRQGLKGD
KGDRGYTGQIGPKGEAGLAAQKGQKGEIGIEGLRGFDGAPGLNGTKGDKGDRGLPGLGTP
GAIGIKGDIGPPGLDGFPGERGDKGDQGYQGLPGLKGDRGLPGQSGQPGSPGMDGAPGIP
GEIGMPGFPGEKGNKGEMGFRGRDGFNGVKGERGPIGPMGPPGPQGPAGPKGNQGLPGVA
IDTKGDKGEIGSPGAPGLRGDKGERGIPGLQGLQGEKGDRGFMGQKGEMGQIGRTGNKGE
RGPAGPAGIPGLTIKGEKGLPGIPGRHGRQGPPGSPGDKGEQGLPGLPGEIGQAGTPGLP
GPRGAKGDQGREGIAGPPGMPGQVGLPGLPGIAGEKGERGEKGETGYGPPGEKGERGPGG
LTGVPGEKGDKGDRGLDGLPGQDGPRGLEGEKGDKGMIGRPGSFGAMGHKGDKGEPANIV
FGPKGEPGPRGPPGLDGMSGRDGAPGSPGIDGPPGIKGDRGFPGVPGPPGLQGLQGIQGL
AGERGFNGRTGLPGPPGPPGAPCVTSDYLTGILLVRHSQTDMVPKCEEGHIKLWDGYSLL
YIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTNQPIPMMPV
ESNEISRYISRCVVCEVPANVIAVHSQTLDIPRCPVNWSPLWIGYSFVMHTGAGGQGGGQ
ALASPGSCLEDFRATPFIECNGEGGTCHHFANKLSFWLTTIDDNKQFAMPQRETIKAGRL
LQRVSRCAVCIKNT
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaacgagttatggttggtggccgctctggcacttttagcggttgtaaattcg
caagaaaactatggaagaggcgatatgggagataataataacatattatatacagacgat
aatgagttttacatgcaaaatgttccggaggcacctccaccacagaatacatacggtctg
tacgcgagacaagattatccagcgccagtgccgccgccacggccgcaaccaaatattggt
ttaaattttgctgtgtacgaccctgtcacaagacaacggaccactcaattcgatcgcaac
tgtactgcacccggctgctgtgttccaaaatgttttgctgaaaagggtaacagaggaata
ccaggatctcctggtcctcaaggccttcgaggtctacctggtcatgagggtattgaaggc
cctcaaggtccaaaaggtcagaagggacaaataggcccccagggtccacgtgggcctagt
ggtgagagaggaaaacccggagctcaaggttttattggtttatcagggcctccgggtgtt
caaggtaaccctggattgccaggaataccgggtagagatggttgtaacggaacggacggt
gaaccaggaccacaggggccacaaggaatgcaaggtccacgcggttttccaggccctaaa
ggagacaaaggtgacaaaggagaagcagcccatactggtcgttatcccgacaaaggtcag
aaaggagagcctggacttgacggaatgcaaggcattcaaggtcctgttggacctactgga
cctcctgggttgcaaggacctaggggaagtacgggtccaatgggaccacaaggagcgaag
ggcgacaaagggtctaaaggtgttaaaggtctatcgatacaaggagacaaaggtgagaga
ggagatcggggacataaagggccaagttgtcccgatgtgattttaccgtctttggataat
aaaggtgccatcaaaggcgtaaaagggaatatgggacataaaggtgaaaaaggtgaacct
ggaaatcaaggtatcaaaggtgacatgggaaatacaggtgaaccaggtttaccaggtcaa
ccaggtgataaaggagaaaaaggcataagaggaaatcctggcgaaagaggcagagacggt
atgtatgggccgcctggacctatgggaccaaagggagatagaggatatgacggaatatct
gggctacctggtagaccaggaagtaaaggtgaacctggcaaggatgggacccccgggtta
aggggattgagaggggtacctggagctccaggtgggcgtgcaggagctcgtggacctcca
ggcccgcccggccctcgtggttatcaaggaccatcaggcgcaccaggtactgctggaaaa
cctggtgatagaggacaaacaggtccaatgggtcctcctggtggtcaaggtgaacctggt
actcctggtagagaagggccagcaggagtgaagggcgagaaaggtgaacctggcttagaa
ggtgcaaagggcgaaattggtcctaggggctacgatggtccaacagggccacaaggacca
agaggcgctaagggtgaaaatggacttactataccaggggaaaaaggtagcgctggttta
cctggtcgtttcggcgataaaggtcaaaaaggtgaaaaaggttacacgggattgagagga
tcacctggtaactctacaaggggaactccgggaatgccaggggaaatgggacctcctggt
gataagggtgataaaggaagtccaggattcgacggtataccaggtaatcctggagcaaaa
ggtgatatcggaggacgttgcaacgaatgctggcccggcagtcaaggaatgaaaggagac
cgaggtagtgatggtactcctggggagcaaggtgaccgaggaccaccagggccaactgga
gttcctggtgaacgaggcgctgatggcctcaacggattcccaggatcacctggtgcaccg
ggtgaccggggtgaagacggacccataggaccaccaggagagcccggaaaagatgccatg
ataccttctaatttgatacaaggaaaaaaaggtgataaaggttcgcaaggcgagaaaggt
cgaatgggtcctaagggtgaaagaggcagtgacggtcttaaaggtgatcggggtcttagt
ggaatgcccggactcaaaggcgacgagggtagaatgggccctccaggaatagatggtatt
ccaggcaacgatggaataccaggcgttccaggacgaaatggactttcaattaaaggagaa
aaaggtgtaccaggagattttggacagaagggtgataagggattccccggcagactcggt
ataaagggtgaaccaggtcaatgtcccgccaatttacaagcattaactaaaggcgataag
ggttttactggtgcaccaggacctgaaggaccacaaggtgataagggagataaaggagat
agaggttatcctggtaaaacgggtgacaaaggtgaaatgggattgccaggagcacaagga
gctgtagggccccgtggatttttgggtcaaaagggtgacaaaggtgaaacaggttcaatg
ggcttcccgggaactaccggtgaagttggtgctagaggtttaccaggcccaccaggaatc
aaaggagataagggcgagataggtccgtccatgccaggaccacaaggattacctggtatg
cgaggtcttaaaggagagaccggtttaagaggtatacctggtacgcccggtaacgatggt
cctccgggcccaattggtttgcaaggtgaaaaaggagatagaggatatactggaagccaa
ggtcccactggtccacccggtccaaaaggtgacgatggtcctgtagggccacctggagtt
ccgggcatacctggtacgcctggaagacaaggccaaaaaggacagcaaggctatccaggc
ctgtacggaaaaccaggtgttataggattaccgggatataagggagaaccaggaatacaa
ggtcccgatggacccaaagggttcccagggccacgtggacgatctggtcttcccggtaac
gtgggaatagatggaactcctggagcaaaaggagacaaaggacaaattggcaatcctgga
ctacctgggcaaagtggatttgatggtccaccaggacctaaaggtgaagcaggtatgaag
ggagaccagggctatccaagccctccagggcctcctggaaggcaaggcttgaaaggtgat
aaaggagatcgtggttatactggccagattggaccgaaaggagaggcaggactagcagca
caaaaaggtcaaaagggtgaaattggaatagaaggacttagaggttttgatggtgcacca
gggttaaatggcaccaaaggtgacaagggagaccgaggtctgcctggccttggaacacct
ggagcaattggtattaaaggcgatattggacctcctggattggatggtttcccaggagaa
cgtggcgataaaggtgaccagggttatcaaggattgccaggcctaaaaggtgatagaggt
ttaccgggtcaatcaggtcaaccaggttcgcctggtatggatggtgctccagggataccg
ggtgaaataggtatgccaggttttccgggtgaaaaaggaaacaaaggagaaatgggtttc
cgtggaagagacggctttaatggtgttaaaggagaacgtgggcctattggtccaatggga
ccacctggacctcaaggacctgctgggccaaaaggaaaccaaggtcttcctggagttgct
atagatactaagggagataaaggagaaattggatctcctggtgcaccaggattacgaggt
gacaagggagaacgtggtatacctggtctccaaggtctacaaggtgaaaaaggagatcgt
ggttttatgggacaaaaaggagaaatgggccaaattggcagaacaggaaataaaggagaa
agaggcccagctggaccagcgggtataccaggacttacaattaagggagaaaagggactt
cctggtataccaggcagacatggacgacaaggaccacctggatcaccgggagataagggc
gagcaaggactaccaggtctacctggagaaattgggcaagctggtacaccaggtcttcca
ggtccaagaggcgccaagggtgaccaaggacgtgagggtattgcaggtccaccaggtatg
ccaggccaagttggtttaccaggcctacctggtatcgcaggcgaaaaaggtgaaaggggt
gagaaaggtgaaacaggttatggtccaccaggtgagaaaggagaacggggcccaggtggc
cttactggagtaccaggtgaaaagggagacaaaggtgatcgaggattagatggcttacct
ggtcaggacggacccaggggacttgaaggtgaaaagggtgataagggaatgataggcaga
ccgggttcgtttggcgccatggggcataagggagataaaggtgaaccagccaatattgtt
ttcggtcccaagggagaaccaggcccacggggtcctcctggcttggatggaatgagtggt
cgtgatggtgctccgggttcacctggaatcgatggacctccagggatcaaaggcgaccgt
ggattccctggagtacctggacctcctggtctccaaggtcttcaaggaatacaagggtta
gcaggtgaaagaggatttaatggacgaactggattgccaggtcctccaggcccacctggt
gctccttgcgttacaagtgactacttgacaggaatacttttggttagacatagtcaaact
gatatggtacctaaatgtgaagagggtcatattaagttatgggacggatattctttactt
tacattgatggaaatgaaaaagcacacaatcaagacctaggctatgcaggctcatgcgtt
agaaaattcagcacaatgccgttcctattctgtgatctgaatgatgtctgtaattacgca
agtagaaacgataggagttattggttatccactaaccaaccaatacctatgatgccggtt
gaaagtaatgaaatttcaagatacatatcgcgatgtgttgtttgcgaagtaccagccaat
gttatagctgtacacagtcaaacactggatattccaaggtgccctgtaaactggagtccg
ttgtggattggatacagttttgtaatgcacactggtgcaggtggccaaggtggtggacaa
gctttggcgagtcctggctcttgtttggaagatttccgcgcgacaccgttcattgaatgc
aatggagaaggtggcacgtgtcatcacttcgccaacaaacttagtttctggcttacaact
atcgatgacaacaaacagtttgccatgccccagcgggaaacaataaaagcaggtcggctg
ttgcagcgtgtatctagatgcgcagtttgcataaaaaacacatag
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integrated database retrieval system
