Epargyreus clarus: 140747977
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Entry
140747977 CDS
T11494
Symbol
l(2)37Cb
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140747977 (l(2)37Cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eclr03041
]
140747977 (l(2)37Cb)
Enzymes [BR:
eclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140747977 (l(2)37Cb)
Spliceosome [BR:
eclr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140747977 (l(2)37Cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND_NTPase5
T2SSE
nSTAND3
Cas3-like_C_2
TsaE
Motif
Other DBs
NCBI-GeneID:
140747977
NCBI-ProteinID:
XP_072936754
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MEKRGKRHHSSSDSDSDEENRLKDLKERDEFAKRLRKRDESKVKKVAEGSNKRSYEEAAK
RLKLEAEDRDKILPKLRVQSRRKYLEKRKDDKVVELEADIADDEYLFDASVLTEREKKER
EHKKTLLQLAKEHEKARELENVQRYHMPQDLGKGEKGEYIEVDENEKLPHSEQRKWEQEQ
IKSAFFKFGAKDAKAQDEYELLLDEQIDFIQALQLEGNKEKKKESEEVSEHQKIRMTIEE
TKISLPVYPFREALIEAIKKYQILIVEGETGSGKTTQIPQYLHEAGFTEDGKKIGCTQPR
RVAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASY
SVMIIDEAHERTLHTDILFGLVKDITRFRPELKLLISSATLDAEKFSNFFDEAPIFRIPG
RRFPVDIYYTKAPEADYVDASVVSVLQIHATQPLGDILVFLTGQEEIETCVEMLQERTKR
IGKKLKELVILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGF
AKQNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTVPE
IQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRR
MAEFPTDPMLAKMLLASEKYKCSEEIVTIAAMLSVNSSVFYRPKDKIIHADTARKNFYHK
HGDHLTLMNVYNQWVESEYSVQWCYENFIQYRSMKRARDVREQLAGLMERVEIEMVSSLE
DDANIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMAHPNSALFEELPRWVIYHELVFTS
KEFMRQVTEIESKWLLEVAPHYYKSKELEDSTNKKMPKTIGKSANNTKSTSIIN
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgtggaaaacggcatcattcctcatcggattcggatagcgatgaagagaat
cgcttgaaggatctcaaggagcgggatgaattcgccaagaggttgcgaaaacgtgacgag
agtaaagtgaagaaggtcgccgagggatctaacaagcgatcgtatgaggaggcagccaag
cgcctgaagctggaagctgaggatagggacaaaatactgcccaaactccgcgtgcagtcg
cgacgaaaatatttagagaaacgtaaagacgacaaagttgtggagctagaagccgacatt
gctgatgatgagtatctttttgatgcaagtgtactaacagagagagagaagaaggaaaga
gaacacaagaagacactactgcaattagcaaaggaacatgagaaggctcgagagctggaa
aatgtccagaggtatcacatgccacaggatcttgggaaaggtgaaaaaggagaatacatt
gaggtagatgaaaatgaaaagttgcctcactctgagcaaagaaagtgggaacaagaacaa
attaaatctgcctttttcaaatttggtgctaaagatgcaaaggcacaagatgagtatgaa
ttgttgttggatgaacaaattgacttcatccaggctctccaacttgaggggaataaagaa
aagaaaaaagaaagtgaagaagtttcagaacatcaaaagatacggatgactatagaggaa
acaaaaatatctctccctgtatacccattcagagaagcacttattgaagcaatcaaaaag
tatcaaattctaattgtagagggagaaactggttctggtaaaacaactcaaataccccaa
tacctacatgaggcaggttttacagaagatggtaagaagattggatgtacacaaccaaga
agagttgctgccatgtcagtggccgcaagagttgcccaagaaatgaatgtcaagttggga
aatgaagttgggtacagtattcggtttgaggactgtacttctgatcgaactgtaataaaa
tacatgacagatggtacattgcacagagaatttttgtcagaaccagatttagcatcatac
agtgtcatgatcattgatgaagctcatgaacgtaccttgcatacagatattttatttggt
cttgtaaaagatatcaccagatttagacctgaattaaaactgcttatatccagtgctaca
ctagatgctgaaaagttctcaaatttctttgatgaagcccctatttttaggataccagga
agaagatttcctgtcgatatttattacacaaaggccccagaggctgattatgtagatgca
agtgtagtgtcagtgcttcagatacatgctacacaaccacttggagatattttagttttc
ctcacaggtcaggaagaaattgaaacttgtgttgaaatgttgcaggagagaacaaagaga
ataggcaagaaattaaaagaacttgtcatcttacccgtgtatgctaatcttcctagtgac
atgcaagctaaaattttcgaaccaacccctgaaggagcacgaaaagttgtgttggcaaca
aatattgctgaaacttctcttacaatagacaatattatttatgtaatagatccaggtttt
gctaagcaaaacaattttaactccaagacaggtatggaaagccttatggtggttcccatt
tctaaagcttcagctaatcaaagggctggaagagctggacgagtagcacctgggaaatgc
ttcaggttatatacagcatgggcctataagtatgagctggaagataatacagtcccagaa
attcagaggattaatttaggaaatgcagttctaatgttaaaggcactaggaattaatgat
ctaatccattttgatttcttggacccacctcctcatgaaactttggttttggctttggaa
caactgtatgcacttggagcactcaaccaccatggggaattgaccaaagctggtagaaga
atggcagaattcccaacagatccaatgcttgcaaaaatgttattggctagtgagaaatac
aagtgttctgaggaaattgtcacaatcgctgctatgttatcagtcaacagttctgttttc
tataggcctaaagataaaataatccatgcagacacggccagaaagaacttttatcacaag
catggtgatcatttaacattgatgaatgtgtacaatcaatgggttgaatcggaatattca
gtgcaatggtgttatgaaaactttattcaatacagatcaatgaagagagctagggatgtg
agagaacagctagcagggctcatggaaagagtggagatagaaatggtgtctagtttagaa
gatgatgctaatataaggaaagctataacagctggttatttttaccacatagctaagttt
tctaaaggtggacattataagacagtcaaacataatcagacagttatggcacatcccaac
agtgcactgtttgaggagctacccaggtgggtgatataccatgagctcgtgttcacctcc
aaagaatttatgagacaagtaacagaaattgaaagcaaatggcttttagaagtggcccca
cattattataaatctaaagaattggaggattctacaaataaaaagatgcctaaaactata
gggaaatcggcaaataatacaaagagtacttcaattataaattaa
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