Epargyreus clarus: 140748121
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Entry
140748121 CDS
T11494
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140748121 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140748121 (fand)
03041 Spliceosome [BR:
eclr03041
]
140748121 (fand)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140748121 (fand)
Spliceosome [BR:
eclr03041
]
Complex B
Other components
Prp19-related factors
140748121 (fand)
Complex C
140748121 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_15
Mad3_BUB1_I
DHR-2_Lobe_A
TPR_10
NRDE-2
ARM_TT21
ARM_TT21_C
PPR
DUF908
Motif
Other DBs
NCBI-GeneID:
140748121
NCBI-ProteinID:
XP_072936956
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MPLLDGKEIEIFFSEEDLPYEEEILRNPFSVKHWLRYIEHKKTAPRNEINMIYERALKEL
PGSFKLWYNYLKLRRSQIRGRCITDPGYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQY
KITSTRKAFDSALRALPITQHHRIWPLYLKFLKKHYIPETALRVFRRYLKLCPEDTEEYI
DYLISVEKLDEAAVKLAHIVNNEHFQSKHGKSNHQLWNELCELISKNPDKIHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVAKKTHPTEDDDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR
VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLHTLWVGFAKFYESNDQIEDARLIFEKATQ
VSFVKVDDLASVWCEWAEMEIKHENYEEALKLMQKATVLPSRKVAYHDDNETVQMRLYKS
LKVWSMYADLEESFGTFKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGTKLERARDLFEQCLEHCPAQFAKSIFLLYAKLE
EEHGLARHAMSVYERATSSVLPEEMFEMFNIYIKKAADIYGVPKTRQIYEKAIETLSEEK
AREMCVRFSEMETRLGEIDRARAIYAHCSQMCDPRITAEFWNTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTVSDLAPGMKDGMRMLEAKAAEMAVQNKG
NILFVRGETQGLKESADKVTNPDEIDIDEEESDNSGDDEEVSPVQKKNIPAAVFGGLVTE
KE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcctttactagatggaaaagaaattgaaatcttctttagtgaagaagatttgccatat
gaggaagaaatattacggaatccattctccgtcaagcattggctaagatacattgagcat
aagaaaacagctcctagaaatgaaatcaatatgatatatgagagagcccttaaagagctt
ccgggatcttttaaactatggtataattacttgaaattaagaagaagtcaaataagaggt
agatgcataacagatccaggttatgaagatgtaaataactgttttgaacggtctttagta
ttcatgcacaagatgcctaggatatggatggactactgctcatttttaaccgatcagtat
aaaataacaagtactagaaaagcatttgatagcgcattaagggcactgcccattacacaa
caccacaggatatggccattataccttaaattcctaaagaaacactatatccctgaaacc
gctttgagagtattccgtagatacctaaaactgtgtccagaagacacagaggagtacata
gactacctaatttcagttgaaaaattagatgaagctgcagttaaattagcacatattgtc
aacaatgaacattttcagtccaaacatggtaaatctaaccatcaactttggaatgaattg
tgtgaacttatttctaaaaatcctgataaaattcactccctaaatgtagatgctatcatt
agaggtggtctgagaaggtacactgatcaattgggccatttatggaactcacttgcagat
tattatgtacgaagtggtctctttgaacgggccagagacatttatgaggaagctattcag
actgttactactgtaagagatttcacacaagtgtttgatgcatatgctcaatttgaagaa
ttaagcttgagcaagaaaatggaggaagttgcaaaaaagactcatcctactgaggatgat
gatattgatctggagctaagactggcaagatttgagtatctaatggaaagaagattatta
ttgttgaattctgtactcttgagacaaaacccccataatgttgcagaatggcataagaga
gtgaaactgtatgaaggcaaacctcatgaaatcatagatacatacacagaagctgtgcag
acagtggatcctaagttagctgtgggaaaattacatacattatgggtcggctttgccaaa
ttctatgagagcaatgatcaaatagaagacgctaggctcatttttgagaaggcaacccaa
gttagttttgttaaagtagatgatttagcatctgtgtggtgtgaatgggcagaaatggaa
attaaacatgagaactatgaagaggccttaaagctgatgcaaaaagccactgtcctccca
agcagaaaggtagcataccatgatgacaatgagacagtacaaatgcgtttatacaaatcc
ttgaaagtttggtctatgtatgctgatttagaagaaagctttggaactttcaaatcctgt
aaagctgtttatgatcatataatagatttaaaaattgcaactccacagataattattaat
tatggtctcttccttgaagaacacaattactttgaggaagcttttagagcttatgaaaaa
ggtattgccctgttcaaatggcctaatgtgtatgacatttggaatacatacttaaccaag
tttttaaaacgatatggtggtacgaaacttgagcgtgctagagatttatttgaacaatgc
ctggaacattgtccagctcagtttgcaaagtctatattcttactttatgccaaattggag
gaagaacatggtttggccagacatgctatgtctgtgtacgagcgtgctacatcttctgtg
cttcctgaagaaatgtttgaaatgttcaacatttacatcaaaaaagccgcagacatttat
ggcgtaccaaaaacgcggcaaatatacgaaaaagctattgaaactttgtctgaagagaaa
gctagagagatgtgtgtgagattttcagaaatggaaacacgcctgggcgaaatagataga
gcgcgagcgatatacgcgcattgcagtcaaatgtgtgatccaagaattactgctgaattt
tggaacacctggaaagaattcgaagttcgacatgggaatgaggacacgatgcgggagatg
ctcagaattaagagaagtgtccaagctacttacaacactcaagtcaatatgatgtctgct
cagatgttaagttcagctgcacaggctgctggtaccgtgtctgaccttgcaccaggaatg
aaagacggtatgcgcatgttagaggcaaaggcagcagaaatggcggtacaaaataagggt
aatatactatttgtaagaggagaaactcaaggacttaaagaaagtgcagataaagttaca
aatcctgatgagattgacattgatgaggaagaatcagacaacagtggggatgatgaagaa
gtttcacccgttcaaaagaagaacataccagctgcagtttttggaggtcttgtaacagaa
aaggaataa
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