Epargyreus clarus: 140748954
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Entry
140748954 CDS
T11494
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140748954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eclr03041
]
140748954
Spliceosome [BR:
eclr03041
]
Complex B
Other components
Prp19-related factors
140748954
Complex C
140748954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf-CCCH_10
Nup35_RRM_2
RRM_7
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
140748954
NCBI-ProteinID:
XP_072938029
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAVSKSTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
SRMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDSALKIQDDLPRNEVNKEYYIQN
LDSQMSKFDPSQPSNSALKSKGASDLLLRLARTAPYYKRNRPHVCSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVAEKLMRRAAAMPALPPPEDRTVTTLYVGNLP
ENITEEELRGHFYQYGEIRSLTLVPRAQCSFVQYTTRSAAEHAAEKTFNRLVIAGKRLTI
KWGKSQGRQGPNDKNEMAPALEPVPGLPGTLPPPPPAFMPFPPQMPPPPNRPNDFFNLHH
YAGPGWAWGGMPPPPPAPPAAPPAPAAPPAPAVPPAPAPAPPAPPAQLHYPSQDPARLGA
HAHASAPHT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcaaaatcaacaaatacgtacaatcgacagaattgggaggactcggatttt
ccaattctatgccaaacatgtttgggagataacccgtacattcgtatgacaaaagaaaag
tatggtaaggagtgtaaaatatgtgcacgtccattcaccgtcttccgctggtgtcctggc
tccagaatgcgctttaagaaaactgaaatttgtcaaacatgttccaaactgaaaaatgtt
tgtcaaacctgccttctagacctcgaatatgggttaccaatacaagtcagggattctgca
cttaaaatccaagatgacttacctcggaatgaagtcaataaggaatattatattcagaat
ttggacagtcagatgtccaagtttgacccgagtcagccgagcaattctgcattgaaatcc
aaaggagcctcagacttattgttacgtttagcgagaaccgcaccttattataagagaaac
agaccgcatgtgtgttcattctgggtgaagggggagtgtcggcgaggtgaagaatgtcca
tacagacacgaaaagccaacagacccagatgaccctctggctgaccaaaatatcaaggac
agatattatggagtaaatgaccctgtagcagagaagttgatgcgtcgtgcagctgccatg
cccgcattgcctccaccagaggataggactgtcacaactctatacgtagggaatctgcct
gaaaatatcactgaggaagagcttagaggacacttctaccaatatggagagataagatcc
ttgacattagtgccacgagcacagtgttcgtttgtacagtataccactaggagtgctgca
gagcatgctgctgagaagacattcaacagactggttattgcgggcaagaggctgactatc
aaatggggtaaatctcaaggtcgtcaaggccctaacgacaagaatgagatggcgccggct
ttagaaccagtgcctggtctgcctggcacactgccgccgccgccacccgcttttatgcca
ttcccaccacagatgcctccgcctccgaaccgtccgaacgacttcttcaacctgcaccac
tacgcgggcccgggctgggcgtggggcgggatgccgccgccgccgcccgcgccgcccgcc
gcgccgcccgcccccgccgcgccgcccgcgcccgccgtgccgcccgcccccgcgcccgcg
ccccccgcgccgcccgcccagctccactacccgagccaggaccccgcccgcctcggtgcc
cacgcacacgcctctgcaccacacacctaa
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