Epargyreus clarus: 140752199
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Entry
140752199 CDS
T11494
Symbol
Upf3
Name
(RefSeq) uncharacterized protein Upf3
KO
K14328
regulator of nonsense transcripts 3
Organism
eclr Epargyreus clarus
Pathway
eclr03013
Nucleocytoplasmic transport
eclr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140752199 (Upf3)
03015 mRNA surveillance pathway
140752199 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140752199 (Upf3)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140752199 (Upf3)
mRNA cycle factors
P-body specific factors
140752199 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF7236
Cytochrome_P460
Motif
Other DBs
NCBI-GeneID:
140752199
NCBI-ProteinID:
XP_072942518
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MTEDLDSKDSQSDSGSKTFINKSKDKKAKAHRPLTKIILRRLPPTMTEEAFLEQVSPIPD
HDHFYFAKADPTLGNNMFSRAYINFVNVDDIYLFRDKFDGYVFLDEKGLEYVGIVEYAPF
QRVPKKKKKKDPKCGTIESDPVYQEFIENLNKDQESENQPKLEYSYPISDGNDKKAQSTP
LLDYLASRKQDKRSRDERRRRENDKRKMRIERKTKDGFIKEEEEIMEIDIKKVKPREWER
EKPSIDLKDDVKSDIKDGTVFESKSYKDQRKPSTSASVIPDKRKKTELDKKDSTFKDEEN
EDDKGFKKDKRDKFKDSPREQKSKKYSDTRKERIKQADIAKTEKQAAISKIMSSEGKPKS
LNHDDIKPFTQLPQVKTDDLAKIIESMDRKVKLEENHSDAKSIKVTNDDSIKASTSKVER
KTDAIVSKIRRESAESDDTTVSEDLELRRQRSVEERGKSLEREGSEEKDKTDSDRRTERR
IRNKDRPSLPIYQPGMGKFSKQRLAKEKDIIPSTSATARTVSDSEKRDT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagatctagactctaaggactcgcagtccgattcgggcagcaagacattcatt
aataagagtaaggacaagaaggcgaaagcccatcgaccattgacaaagataattctgcgg
cggctgccacccaccatgacggaagaggcgtttctggagcaagtgtcccctattccggac
cacgatcatttctacttcgccaaagccgaccctaccctcggaaataacatgttttcaaga
gcgtacataaattttgttaacgtggacgatatctatctattccgagataaatttgatgga
tatgtatttttggacgagaaaggccttgagtatgtaggtatagtagagtatgccccattc
cagagggtgcctaaaaaaaagaagaagaaggatcccaaatgtgggaccattgagagtgac
ccagtttaccaggagttcatagagaacctcaacaaagatcaggaaagtgaaaaccaacca
aaactggaatattcatatccaatcagtgatggaaatgataaaaaagcacagtcaactccg
cttttggattatttggcatcccgtaaacaggataagaggagtcgtgatgaacgccgtaga
cgggagaatgacaaaaggaaaatgagaattgaaaggaaaactaaagatgggtttatcaaa
gaggaagaggaaataatggaaattgacataaagaaagttaagccaagggaatgggagagg
gagaaaccaagtatagacttaaaagacgatgttaaatcagatattaaagatggaactgta
tttgaatctaaatcatataaagatcaacgtaagcccagcactagtgctagtgttatacca
gataagaggaaaaagacagaactcgataagaaagacagtacttttaaagatgaagaaaat
gaggatgataaaggatttaagaaagataaacgagacaagtttaaggactctccgcgtgaa
caaaaaagtaaaaagtatagcgatacaagaaaagagagaattaaacaggctgacattgcg
aaaacagaaaaacaagcagccataagtaaaattatgtcttccgaaggcaaaccgaaatca
ttaaatcatgatgatattaaacctttcactcagctgccccaagtgaagactgatgattta
gctaaaataattgaaagtatggataggaaagttaaattggaagagaatcattctgatgct
aaatcaattaaagtaaccaatgatgatagtatcaaagcatcaacatctaaagtggagcgt
aaaactgacgctattgtttctaagattcgaagggagagtgcggaatctgacgatactacc
gtcagtgaagatttagagctaaggagacaaaggtctgttgaagaaaggggtaaatctttg
gagcgcgaaggatctgaagaaaaagacaaaactgatagtgatcgtcgcacagaacgtagg
attaggaataaggaccgtcccagcctgccaatttaccagccaggcatgggtaagttcagc
aagcagcgactagctaaggagaaggacatcataccttcaacctccgctacagcaaggaca
gtcagtgacagtgaaaaacgggatacctga
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