KEGG   Epargyreus clarus: 140752751
Entry
140752751         CDS       T11494                                 
Symbol
CstF50
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
eclr  Epargyreus clarus
Pathway
eclr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eclr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140752751 (CstF50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eclr03019]
    140752751 (CstF50)
Messenger RNA biogenesis [BR:eclr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     140752751 (CstF50)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st CSTF1_dimer WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_EIPR1 ASA1 DSE1_N CFAP251_N PAC11 eIF2A NBCH_WD40 Ge1_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_DCAF12 RMC1_N Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Dicer_dimer
Other DBs
NCBI-GeneID: 140752751
NCBI-ProteinID: XP_072943196
LinkDB
Position
Unknown
AA seq 433 aa
MKEGSTDHDMKNVVKNRELLYRMIISQLYYDGYQAIATTLAAAVHADPACPPSDRLLNLM
MVGLQNEPDRKDRLAASSGAEHLLGTTGFDLEYEMDASSLAPEPSAYETAYVTSHKMACR
AGAFSACGQLLATGSVDASIKILDVERMLAKSAPEEVDPGREQQGHPVIRTLYDHTDEIT
ALDFHPREQILVSASRDCCIKLFDITKASAKKAYKSITDAEQVLCVAFHPLGDHVIASTT
HPVIRLYDVTTSQCFVCPVPSHHHTKQVNSIKFSPNGKYFASGSADGAVKLWDTVSNRCF
NTFAAAHDGAEVCSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQEHHA
QAIFNHTEDYVMFPDEATTSLCTWHSRSASRGSLMSLGHNGAVRHIVHSGTAPAFLTCSD
DYRARFWFRRNTH
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgaaggaaggttccaccgatcatgatatgaagaatgtggttaagaaccgagagttgctc
tatcgaatgataataagtcaactctactatgatgggtatcaagcgatcgctacaaccctg
gctgcagctgtccatgctgatccagcgtgccctccaagtgacagactcttaaacctgatg
atggtgggactccagaatgaacccgacaggaaggaccgtctcgcagcctccagcggtgct
gagcatctcctcggtaccactgggtttgatctcgaatacgagatggacgcgtcatctcta
gctccggaaccctcggcgtatgaaactgcgtacgtgacgtcacacaagatggcgtgccgc
gcgggtgctttcagcgcttgtggacaactgttagctactggcagtgtggatgctagtatc
aagattctggacgtggaaagaatgctagccaagtcagccccagaggaagtggaccctggg
agggagcaacagggtcatccggtgataaggactctttacgaccacacggatgaaataacc
gccctggacttccaccctcgggagcagatcctggtatcagcttccagggactgctgcatc
aaactcttcgacatcaccaaggcatcggctaagaaggcctacaaatctataacggacgcg
gagcaggtcctctgcgtggcgttccaccccctgggcgaccacgtgatagcctccaccacc
caccccgtcatcaggctctacgacgtcaccaccagccagtgcttcgtgtgccccgtacct
tctcaccatcacaccaagcaggtgaacagcatcaaattctcccctaacggcaagtacttc
gcgagcggcagtgcggacggcgcggtgaagctgtgggacacggtgtccaaccgctgcttc
aacaccttcgcggcggcccacgacggcgccgaggtctgctccgtggcgttcaccaggaac
agcaagtatctcctgacatccggattggattcttcgatcaagctttgggagttggcgagc
agtagatgccttatacagtacaccggcgctggaactaccggaaagcaagagcaccacgcc
caagcgatattcaatcacactgaggactatgtgatgtttccggatgaagcgacgacgtca
ctatgtacgtggcactcgaggagtgccagtcgggggagcctcatgtccctaggacacaat
ggtgctgttaggcacatagtacattccgggaccgcaccagccttcctgacatgcagcgat
gattaccgagcgagattctggtttagacgcaatacgcattaa

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