Epargyreus clarus: 140752771
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Entry
140752771 CDS
T11494
Symbol
Brr2
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140752771 (Brr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eclr03041
]
140752771 (Brr2)
Enzymes [BR:
eclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140752771 (Brr2)
Spliceosome [BR:
eclr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140752771 (Brr2)
Complex C
U5 SnRNP specific factors
140752771 (Brr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
AAA_30
HTH_61
Cucumo_coat
Motif
Other DBs
NCBI-GeneID:
140752771
NCBI-ProteinID:
XP_072943221
LinkDB
All DBs
Position
Unknown
AA seq
2145 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRGRDEATGEVLSLSGKLGGTRMGDRAQRTK
PDKAEERKAKRQKRDEATYELSKSKAARVAWADDTPGALYRPRAQHTRHAYELLLAFMQS
ALGDQPRDILCGACDEVLVVLKNDKLKDPDRKKEIELLLGPIPDERFALLVNLGKKITDF
NISAATEGNAEIDETYGINVQFEESSEEDDEDAYGEVRDEEKEEGEGTDNDEEKGSSGDE
DSDGEGRKNAIHANLSEEQSQKRRDATLHPMDIDAYWLQRRLSRHFPDAMVSQAKSSEVL
RALADAADERDLENRLVLLLGYDCFELVKMLNRFRYTVLYCTKLASSQSESERAAIREEM
SKQPHLQKILAQLDTGKGDDETTQQSEAPRKRQKTEGGATEAGQVGGARKVLQLEELVFA
AGAHFMANKRCQLPPGSFRKQRKGYEEVHVPALKPKPFEEDETLVAIEKLPKYVQPAFEG
FKTLNRIQSRISKAALETDENLLVCAPTGAGKTNVALLCALREVGKHVNDDGSVSAQDFK
VIYVAPMRSLVQEMVGNFSKRLAAYNIRVSELTGDHQLTREQIDATQLIVCTPEKWDIIT
RKGGERSFTNLVRLIIIDEVHLLHDERGPVLEALVARTLRTVEQTQEKVRLVGLSATLPN
YVDVAAFLRVKPEVGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKTMEHAG
RNQILVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASVEVLRTEAEQVKNPELREL
LPYGFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIVKGTQVYSPE
RGRWSELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKL
PDMLNAEVVLGSVQSVRDAVKWLGYTYLYVRMLRQPALYGMSADRLQEDPLLELHRADLV
HTAACLLDKAGLIKYERKSGHFQPTELGRIASHYYCTHETMHAYNQLLKPTLGEIELFRV
FSLSAEFRHVAVRDEEKLELHKLMERVPIPIKESIEEPSAKINVLLQAYISQLKLEGFAL
MADMVYVTQSACRLLRAIFEIVLHRGWAQLVDKTLALCKMVDRRMWQSMSPLRQFRKMPE
EIIKKLEKKNFPWEKLYELGPNEIGELVRAPKLGKMVHKYVHQFPRLELATHIQPVTRST
LRVELTVTPDFHWDEKVHGQSEGFWILVEDVDSEVVLHHEYFLLKEKYCKDEHRVKLFVP
VFEPLPPQYFLRIVSDRWIASETQLPVSFRHLILPEKNLPPTELLDLQPLPVSALRREQY
EALYADSFPQFNPVQTQVFNAVYNSDDNVFVGAPSGSGKSVIAELALLRLLSTNPQGRAV
YLLPKDALADIVFADCYHKFGAKFNLKVVQLTGETATDHKLLNKGQIIVTTADKWDVLSR
RWKVRKSVQNISLLIVDALQLLGGEEGPVLEVVCSRMRYISSQIGRQIRIVALSLPLADA
RDVAAWLGCNAAATFNFHPSVRPLPLELHVQGFNISHAGSRLAAMTRPVYNAVTRHAGTR
PCAVFVPSRRHARLLAADLLALANAHGAPARFLHARPDLLQPFLKRLKDKMLKVTLASGV
AYLHEGVEPGDRRLVQQLLESGAVQLCVVCAELAWAFAARVHTVIVADTHTYNGKLHCYE
QYPITTVLQMIGRACRPLEDDHSVAVLMCVSHHKTFYTKLLNDCLPLESHLDHRLHDHMN
AEIVTKTIENKQDAVDYLTWSFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVEGTLAELE
QAKCIAVEDEMDVQPLNLGMIASYYYINYTTIELFSLSLTSKTKIRGLLEIISSAAEYSE
LCIRHREENIIKALAAKVPHKPTASSGSTVRYNEPHVKAHVLLQAHLSRAQLPAELQADT
AAVLTKAIRLIQACVDVVSSSGWLSPAVAAMELAQMVTQAMWAKDSYLRQLPHFTPELVQ
RCADKGVETVFDVMELEDSSRAKLLQLSPTEMADVARFCNRYPNVELTYEVKNERRLRAG
KPIVVEVSLEREDDIVGPVIAPFFPQKREEGWWVVIGDPKSNSLLSIKRVSLARSAKVRL
DFICGTSGRHTYTLYFMSDAYLGADQEYKFTVDVQETASGSSDSE
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcggcggctagacagctgcaatatgaatataaagctaactcaaacctcgtg
ctacaagctgatgtgaggctcatcgagcggcgtggtcgtgatgaggcgaccggtgaggtg
ctgtcgttgtccggcaaacttggtgggactcgtatgggggatagggcacagaggaccaag
ccggataaggccgaggagaggaaggctaaacgtcaaaaacgcgacgaggcgacatacgaa
ctatccaaatccaaggcggcccgcgtcgcctgggcggacgacacgcccggcgcgctgtac
cggccgcgcgcgcaacacacgcggcacgcgtacgagctgctgctcgccttcatgcagagc
gcgctcggggaccagccccgggacatactgtgcggggcgtgcgatgaggtacttgttgtg
ttgaagaatgacaaattaaaggatccagatcggaagaaagaaatcgaactactgttggga
ccgatcccagatgagcggttcgcgttgttagtcaatctgggcaagaagataacagacttc
aacataagcgcggcgacggagggtaatgcggagatagatgagacatacggcatcaacgtg
cagttcgaggagtcttcggaggaggacgacgaagacgcgtatggagaggttcgtgacgag
gagaaggaggagggtgaaggtactgacaacgacgaggagaagggcagcagcggcgacgag
gacagcgacggtgaagggcggaagaacgctatacacgctaacctgagcgaagagcaatcc
cagaagcgtcgcgacgccacgctccacccgatggacatcgacgcgtactggctgcagcgg
agactctccagacacttcccggacgccatggtctcgcaggccaagtccagcgaggtgctc
cgggctctcgcggacgcggccgacgagcgggacctggagaacaggctggtgctgctgctc
ggctacgactgcttcgagctggtcaagatgctgaacaggttccggtacaccgttctgtac
tgcacgaagctggcgtcctcccagtcggagagcgagagggcggccatcagggaggagatg
tccaaacagccgcacctccagaagatcctggctcaacttgacaccgggaagggggatgat
gagaccacccaacagtcagaggcgccgcgtaaacgtcagaagacagagggcggggcgacg
gaggcggggcaggtgggcggggccaggaaagtactacagctggaggagttagtgttcgcc
gctggtgcacacttcatggccaacaagcggtgccagttaccgcccgggtcgttcaggaag
caacggaagggttacgaagaagtccacgtgccggcattaaaaccgaagcccttcgaagag
gacgaaaccctagtggccatagagaagctgcccaagtacgtacagccggcgttcgaaggg
ttcaagaccttgaataggatacagagtcgcatatcaaaagcggcgttagaaaccgacgag
aaccttctcgtatgcgctccgaccggtgccgggaagactaacgtggcgctcctgtgcgcg
ctgagagaggtcggcaagcacgtgaacgacgacggctccgtgagcgcgcaggacttcaag
gtcatatacgtggcgcccatgcgctcgctggtgcaggagatggtaggcaacttcagcaag
cgtctcgcagcgtacaacatccgcgtctccgagctgaccggcgaccatcagctgacgcga
gaacagatcgacgccacgcagctcatcgtgtgcacgccggagaagtgggacatcatcacc
aggaaaggtggcgagcgttccttcacgaacctggtgcgtttgatcatcatcgacgaggtc
cacttgctgcacgatgagcgaggacccgtgctggaggcgttagtggccaggacgctgaga
acagtcgagcagacccaggagaaggtccgtctggtcggtctgtccgctacgctaccgaac
tatgtcgacgtagcggcgttcttgcgcgtcaagcccgaagtgggattgttttacttcgac
aattccttcagaccggtggcgctcgagcagcagtatatcggcgtgacagagaagaaggcg
ctcaaacggtttcaggtgatgaacgacatcgtgtacgagaagaccatggagcacgccgga
cggaaccagatcctggtgttcgtgcactcgcgcaaggagacgggcaagacggcgcgcgcg
atacgagacatgtgcctcgagaaggacacgctcggacagttcctcagggagggttcagcg
agcgtggaggtgctccgcaccgaggctgaacaggtgaagaacccggaactccgcgagtta
ttgccgtacggcttcgcgatccaccacgccggtatgagccgcgtggatcgaacgctggtt
gaggatctgttcgccgacagacatatacaggtgttagtgtcaacggcgacgctcgcgtgg
ggtgtgaacctccccgctcatacagtgatagtgaagggcacgcaggtgtattcgccagaa
cgtggccgatggagcgagctcggagccctagacgtgctgcagatgctgggccgcgcgggc
cgcccgcagtacgacaccaagggcgagggtatcctgataacgaaccactctgagctgcag
tactacctgtcgctgctgaaccagcagctgccgatagagtctcagctggtgagcaagctg
ccggacatgctcaacgcggaggtggtgctcggctccgtgcagagcgtgcgcgacgcggtc
aagtggctcggttacacgtacctctacgtgcggatgctacgtcagccggcgctgtacggc
atgtccgcggaccggctgcaagaggacccgctgctggagctgcaccgcgctgacctcgtg
cacactgcggcctgtctgctggataaggccggcctgatcaagtacgagcgcaaatcgggt
cacttccaaccgaccgaactgggtcgcatcgcctcgcactactactgcactcacgagaca
atgcacgcgtacaaccagctgctgaagccgaccctgggggagatcgagctgttcagggtg
ttctcgctgtcggcggagttccggcacgtggccgtcagggacgaggagaagctcgagctg
cacaagctcatggagagggtcccgataccgatcaaggagagcatagaggagccctcggcg
aagatcaacgtcctcctccaggcgtacatctcgcagctgaagctggaggggttcgcgctg
atggcggacatggtgtacgtcacgcagtccgcctgccgcctgctgcgcgccatcttcgag
atcgtgctgcacagaggctgggcccagttggtggacaaaactctagcgctgtgcaagatg
gtggaccgccgcatgtggcagtcgatgtcgccgttgcgacagttcaggaagatgccggag
gagataataaagaaactcgaaaagaagaacttcccgtgggagaaactctacgagctcggt
ccgaacgagatcggcgaactcgtccgcgcgccgaaactcggcaagatggtgcacaaatac
gtacaccagttcccgcgactggagctcgccacacacatccagcccgtcacgcgctccacg
ctgcgggtggagctcaccgtcacgccggacttccactgggacgagaaggtccacggccaa
tccgaaggcttctggatcctcgtcgaggacgtcgactccgaggtggtcctccaccacgag
tacttcctacttaaggagaagtactgcaaggacgagcaccgcgtcaagctgttcgtgccg
gtgttcgagccgctgcccccgcagtacttcctgaggatcgtgtcggacaggtggatagcc
tccgagacccagttaccggtgtccttccggcacctgatcctgccggagaagaacctgccg
cccaccgagctgctggacctgcagccgctgcccgtgtcggcgctccgtcgcgagcagtac
gaggcgctgtacgcggactcgttcccgcagtttaaccccgtgcagactcaggtcttcaac
gcggtatacaactcggacgacaacgtgttcgtgggcgctccgtccggctccggcaagtcg
gtgatagcggagctggcgctgctgcggctgctatccaccaacccccagggtcgcgcggtg
tacctgctgcccaaggatgctctggctgatattgtcttcgccgactgctatcataagttc
ggcgcaaagtttaatctcaaggtggtgcaactgaccggcgagacggcgaccgaccacaag
ctgctgaacaagggacagatcatagtcaccaccgcggataagtgggatgtactgtcccga
agatggaaagtacgcaagagtgtgcagaacatctccctgctgattgtggacgcgcttcag
ttgctgggtggtgaggaggggcccgtgctggaggtggtctgctccaggatgagatatata
tcgtcacagattggccgtcagatccgcatagtggcgctgtcgctccccctggcggacgcg
cgcgacgtggcggcgtggctgggctgcaacgcggccgccaccttcaacttccacccgagc
gtccgcccgctgccgctggagctgcacgtgcagggcttcaacatatcgcacgctggctcc
cgcctcgccgcgatgactcgtcccgtgtacaacgcggtgacgcgtcacgccgggacgcgg
ccgtgcgcggtgttcgtgccgtcgcggcgtcacgcgcggctgctcgctgcggacctactg
gcgttggccaacgcgcacggtgctccggctcgctttctacacgctcggcctgatctgctg
cagccgttcttgaagaggctcaaggacaagatgctgaaagtcaccctcgcctcgggcgtg
gcgtacctccacgagggcgtggagcccggcgacagacgcctggtgcagcagctgctggag
tcgggcgcggtgcagctgtgcgtggtgtgcgcggagctcgcgtgggcgttcgcggctcga
gtgcacaccgtcatcgtggcggacacgcacacatacaacggcaagctgcactgctacgag
cagtacccgatcacgaccgtgctacagatgataggtcgagcgtgtagaccgctggaggac
gaccattcggtggcggtgctcatgtgcgtgtctcaccacaagacgttctacactaagctg
ctcaacgactgcctgccgctcgagagccacctggaccacagactccacgaccacatgaac
gcggagatagtcacgaagacgatagagaacaagcaggacgccgtggactacctcacgtgg
agcttcctctaccgcaggctgacgcagaaccccaactactacaacctccagggcgtcacg
cacaggcacctgtcggaccacctgtcggagctggtggagggcaccctggcggagctggag
caggccaagtgcatcgcggtggaggacgagatggacgtgcagccgctcaacctcggcatg
atcgcgtcctactactacatcaactacaccaccatagagctgttcagcctttcgctcacg
tctaagacgaagatccgagggctgctggagatcatatcctcggctgcggagtactccgag
ctgtgcatacgtcatcgtgaggagaatatcatcaaagcgctggctgctaaggtgccgcac
aagccgacggcgagcagcggcagcacggtgcgctacaacgagccgcacgtgaaggcgcac
gtgctgctgcaggcgcacctgtcccgcgcgcagctgcccgccgagctgcaggccgacacc
gccgccgtgctcaccaaggcgatccgtctgatccaggcttgtgtggacgtggtctccagc
agtgggtggctctcaccagcggtcgcggcgatggagctggcgcagatggtcacccaggcg
atgtgggccaaggactcgtacctccgccagctgccccacttcacgccggagctggtgcag
cggtgtgctgataagggtgtggagacggtgtttgacgtgatggaactggaggacagttcc
cgtgcgaagctgctgcaactgtcgccgacggagatggctgatgtggcgcgcttctgtaac
cggtatcctaacgtggagctaacgtatgaggtgaagaacgaacgtcgtctacgagctggt
aagccgatagtggtggaagtttcgctggagcgagaggacgacatcgtgggacctgtaata
gctccgttcttcccgcagaaacgcgaggaaggctggtgggtggtgataggcgaccctaaa
tcgaattctctactgtccataaaacgagtgtcgcttgctcgcagcgccaaagtgcgcctg
gacttcatatgcggcacatctggacgccacacgtacacactctacttcatgtcggatgcg
tatcttggtgctgatcaggagtacaagttcaccgtggacgtccaggagacagcctcgggc
tccagcgactctgaatag
DBGET
integrated database retrieval system
