Epargyreus clarus: 140752953
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Entry
140752953 CDS
T11494
Symbol
pea
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140752953 (pea)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eclr03041
]
140752953 (pea)
Enzymes [BR:
eclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140752953 (pea)
Spliceosome [BR:
eclr03041
]
Complex C
Other components
Step II factors
140752953 (pea)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
GIPC1_GH2
AAA_22
AAA_19
Flavi_DEAD
AAA_30
Sigma54_activ_2
nSTAND3
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
140752953
NCBI-ProteinID:
XP_072943356
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MDEVAKLEHLSLVSKVCTELDNHLGLNDKDLAEFIIDLADKNPNFDGFKKALNENGAEFS
DSFMTNLLRIIQHMKPVKSSTQNNDKEVTSGNPLAMKFPGLALPNDKPQKFSSDEESDAE
DKKTKRITSKDLFKQESKKKESITEVVDQAMAELEALAPSNVKSIDDDVERKGDKVREKS
VERKSRVKRDSSRDRKRRRSSSKEKHSRSYDKRSRSRDRRSRSRDKRSRSRDRSPERRSR
RSRSRDRDREKRRRSRSRDRRRSKSRDRYRRSRSRGRRLKSRSHSRDRDRATKDRYRDND
RDFDKKPRRRSQEAPVSDDPEPGKIYTGRVANIVSFGCFVQIEGIRKKWEGLVHISQLRS
ECRVSSVSDVVSRGDKVKVKVLSVTGQKVSLTMKDVCQETGKDLNPASHAHLEAEREGRN
PDRPPPAATVLAGLQQNLDPDEDSSRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEE
TGLLPKDEDGEADIEIELVEEEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALA
KERREQKMIQREAEMESLPTGLNKNWIDPLPDADSRALAANMRGTGITPQDLPEWKKHVI
GGKKSSFGKKTNLSLLEQRQSLPIYKLKDELTKAVSDNQILIVIGETGSGKTTQITQYLA
AAGLPARGRVACTQPRRVAAMAVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETIIKYMTD
GMLLRECLMDLDLKTYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAV
KFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQ
EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAE
TSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLY
TERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHS
LSALDAEGLLTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKD
KQALADQKKAKFNQPEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLL
GIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN
RQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYN
KYEEPNAWRISRVRRRRN
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgcaaaactagaacatctttcccttgtgtccaaggtctgtactgaactg
gacaaccacttaggcctcaatgacaaggatttggccgaattcatcatagatttagcggat
aaaaacccaaactttgatggcttcaagaaagctctcaatgaaaatggggcagaattctcg
gactcgtttatgactaatttgcttcgtattattcagcatatgaaaccggtcaagtctagt
acacaaaataatgataaggaggttacatctggtaaccctcttgctatgaagtttcctgga
ctggccctaccaaatgacaaaccacagaaattctcatctgatgaagaaagtgatgcagag
gacaaaaaaacgaaaagaatcacgtccaaagatttatttaaacaagagtccaaaaagaaa
gagagcatcactgaagttgttgatcaagctatggcggagctggaggcgttagcgccgtca
aatgttaagtctatagatgatgatgtagaaagaaaaggagacaaggttcgtgagaagagt
gtagagcgtaagagtagagttaaacgtgacagttccagagatcggaaaagacgaagaagt
tctagcaaagagaagcatagtcggagctatgataagcgcagtcgcagtagagatagacgt
agtcgtagcagagacaagcgtagtcgtagtagagacaggagtccagagcggaggagtagg
aggagcagaagtagggatagagacagggaaaagcgaagacgttccagaagtcgcgatcga
cgtcgttcaaagtcgagggacagatacagaaggtccaggtctagagggcgaagattgaaa
tcaagatcccattcccgtgacagagatagagctactaaagataggtatcgggataatgac
agagactttgataagaagccaagaagacgtagccaagaggcaccagtgagcgatgaccca
gagcctgggaaaatttacactggcagagtagcaaacatagtttcatttggatgttttgtg
caaatagaaggcatcaggaagaagtgggagggtctggtgcatatttcgcagctgcggtcg
gagtgcagggtcagcagcgtgtcagatgtagtatccagaggggataaagttaaggtgaag
gtattgtcggtgactggacagaaagtctccctcacaatgaaggacgtctgccaggagact
ggcaaagatctcaacccagcatcacatgctcatttagaggcagaacgtgaaggtagaaat
ccagatagacctccaccagcagccacagtgctggcggggctgcagcaaaacctggatccc
gatgaagactctagcaggaagcgtgtcacaaggatttctagcccagaacgatgggaaatc
aaacagatgatatcatcaggagtgatagacaagagtgagttaccggacttcgacgaggag
actggtctgctgccgaaagacgaagacggcgaggctgacatcgaaattgaactcgtggaa
gaagaaccgccattcctccagggccacggcagagctctccatgatttgtctcctgtgaga
atagtcaagaacccagatggctccttagcgcaagcagcgatgatgcaatcggctttagca
aaagaaagaagagagcagaaaatgatccaaagggaagcggagatggagagcttgccaacc
ggtttgaacaagaactggatagatccattaccagacgcagacagtcgggcgttagcagcg
aatatgagaggaactggcatcactcctcaagatctgccagaatggaaaaagcacgtcatt
ggtggtaagaagtcatcatttggcaagaagaccaacttgtccttgttggagcagaggcag
tctttgcctatttataagctcaaagatgaattgacaaaggcggtgtcggacaaccagatc
ctgatagtgatcggcgagacggggtcgggcaagacgacgcagatcacgcagtacctggcg
gcggcggggctgccggcgcgcggccgcgtggcgtgcacgcagccgcgccgcgtggccgcc
atggccgtcgccaagcgcgtcgccgaggagttcggctgccggctcggccaggaggtcggc
tacaccatccgcttcgaggactgcaccagcccggagactatcatcaagtacatgacagac
ggtatgttgctgcgagaatgcctaatggacctagacttgaagacctattcagtgatcatg
ttggacgaggctcacgagcgcaccatccacacagacgtcctcttcggtctgctcaaacag
gccgtgcagaaacgtccagaacttaagcttatagtcacatctgccactttggatgctgtc
aaattctctcagtacttcttcgaagctccaattttcacaataccaggcagaacattcccg
gtagaagttttatacacaaaggaaccggaaactgactatctggatgcctctctcatcaca
gtaatgcagatacatttaagagaaccgcctggcgatattttgctcttcctcacgggtcaa
gaggagatcgacacagcctgtgagatcctttacgaaaggatgaagtctttaggacctgat
gtgcccgaattaatcattctgccggtatattctgccctaccatctgagatgcaaacgagg
atattcgagcccgcgccacccggatctaggaaggtggttatcgccaccaacattgcagaa
acttccttgacaattgacggtatctactatgtggtagatccaggtttcgtgaaacaaaaa
gtgtacaattctaagactggtatggattcacttgttgtcacaccaatatcacaggcagcg
gcgaagcagcgcgcgggccgcgcggggcgcacgggcccgggcaagtgctaccggctgtac
acggagcgcgcctaccgcgacgagatgctgcccacgcccgtgcccgagatacagcgcacc
aacctcgccaccactgtgttgcagctgaagacgatgggcatcaacgacctgctgcacttc
gacttcatggacgcgccgccggtagagtcgctcatcatggcgctggagcagctgcactcg
ctctccgcgctcgacgcggaggggctgctcacacgcctcggtcgcaggatggcagagttc
ccgctagagccaaatctttcgaagatcctcataatgtcggtagcgctacagtgttcagac
gagatcctgacaatcgtctccatgctgagcgtgcagaacgtgttctaccggcccaaggac
aagcaagccttggcggaccagaagaaggccaagttcaaccagccggaaggcgaccacctg
acgttgctggctgtgtacaacagttggaggaacaacaagttctcgaacgcgtggtgttac
gagaacttcgtgcagatacgcacgttgaaacgcgcgcaggatgtccggaaacagctgcta
ggaataatggacagacataagttggacgtggtgtctgcgggcaagaacacagtacgcatc
cagaagaccatctgctcgggtttcttccgcaacgccgccaagaaggaccctcaagagggg
taccgcaccctcgtcgacagccaggtggtctacatccacccctccagcgctctcttcaac
aggcaaccagagtgggtaatttaccatgagctggtacagacaacgaaggagtatatgcgc
gaagtgacgactatagatccaaagtggctggtggagttcgcgcccgccttcttcaagttc
tccgatcccacgaagctttccaaatttaagaagaaccagcgtctcgagcccctttacaat
aagtatgaagaacccaacgcttggagaatctcacgtgtccgtagaagaaggaattaa
DBGET
integrated database retrieval system
