Epargyreus clarus: 140754313
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Entry
140754313 CDS
T11494
Symbol
Cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
eclr Epargyreus clarus
Pathway
eclr03015
mRNA surveillance pathway
eclr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140754313 (Cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140754313 (Cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140754313 (Cpsf6)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
140754313 (Cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
140754313
NCBI-ProteinID:
XP_072945405
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MADGGVDIDLYADDIESDFNRQDDFGGDNVDLYDDVIAAPASKPDDGDGPPNSVPPQHPP
EETNGGAPYHNNASNHHHGRRFQLYVGNLTWWATDQDIANAVADVGVTDFQDVKFFENRA
NGQSKGFCVISLGSDQSIRMVLDRLGKKEIHGQHPVVTLPTKQALNQFESQSKTRSTPPG
PNNPGMRGPPHPGGPPGPHPGDLHCLDFFGGGPNGPGPNGPRMMMPGPAHHQLRGPPPGP
HGHGPPPHHLPQHQGPPPHHLPHQGPPPGHQGPPPGHRPPMQFQGPPQMQRAGPRAGPEW
APRGPPHHMQPAPAPQYGPPQHQLHQMPPPHAVTPPGQGMPPPHHQLPPHQQGPPRGPAP
LPQHPGVGGAPAPHVNPAFFSQQPPVQPPPNQPPPGPPGPPGPPGHFNAPHSEHLIYSPG
APYGHPSHGAPPPAQGPRQPPYGRPPQSYPSAEARPAHHPPPLGPHAPHAPHAPHAPHAP
HAPHAPIPAISEAEFEEVMSRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSK
VAHDDRCKILISSLQDTLHGVETKSYSGERRRSRSRERESRPHHRAPRRRERSASRYRDR
SRDRDERDRYRERSRDRDRERDRDAYYRDYRERERDRSRSRERERADHYNRGHSREERPR
KSPVEAAAEAGAAEAGSTKRAAAAPYYDERYRERRDREPPPADRDRDRERDHRRDARDQR
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggcgtggatatagatctctacgccgatgatattgaatcagattttaac
cgtcaggacgacttcggaggtgataatgtggatttgtacgacgacgtgatcgccgcgccg
gcatcgaagcccgacgacggagacggtcctccgaactccgtgccgccgcagcacccaccg
gaggagacaaacggcggcgcgccctatcacaacaacgcctcaaatcatcatcatggccga
cgcttccaactttacgtcggcaatctcacctggtgggcgacggatcaagacatagctaac
gccgttgcggacgtcggcgtaacggactttcaagatgtcaagtttttcgagaacagggca
aatggacagtcgaaggggttctgcgtgatttcccttgggtccgaccagtccataaggatg
gtcttggatcgcttgggcaagaaagaaattcatgggcagcacccagtcgtcacattgcct
acaaaacaggcactgaatcagtttgagagtcagtcgaagactaggtctaccccaccggga
ccaaacaatccagggatgcggggacctccacatcccggcggtccacctggaccccaccca
ggagatttacattgtttagatttcttcggcggagggccgaacgggccaggtcctaacgga
ccgcgcatgatgatgccgggtcctgcccatcatcagctccgtgggccgccgccgggacct
catggtcacggtccgccaccacaccatctgccgcagcaccagggacctccgccccatcat
ctgccacatcagggacctccacctggccatcagggcccaccaccaggccataggccaccc
atgcagttccaaggtccgccacaaatgcaacgcgcgggtccgcgggccgggcccgagtgg
gcgccgcgcgggccgccgcaccacatgcagccggcgcccgcgccgcagtacggcccgccg
caacaccagctgcaccagatgccgccgccgcacgcggtcacgccgccagggcaagggatg
ccacctccacatcatcagctaccccctcatcaacagggtccgccgcgtggaccagcgcca
ttgccccaacatccaggcgtaggtggcgctccagcaccgcacgtgaacccggcgttcttc
agccaacaaccgccggtgcaaccgccgccgaaccaacctccacccgggccgccgggccca
ccgggacccccgggacacttcaacgcaccacacagtgagcacttaatatatagcccggga
gcaccttacggacacccatcacacggcgccccaccgccggcccaaggccccagacaaccg
ccatatggtcgtccgccacagagctacccgtcagcggaggcgcgtcccgcccaccatccc
ccaccgctcggaccccacgcgccccacgcaccccacgctccccacgcaccccacgcgccc
cacgctccccacgcgccaatccccgctatcagcgaggcggagttcgaggaggtgatgagc
cgcaacagaacggtgtcttcgagcgcgatcgcgcgcgccgtcagcgacgccgccgcgggt
gaatacgcctcggctatagagacgctcgtcactgctatatcgctcatcaagcagagtaag
gtggcgcacgacgaccgctgcaagatactgatatcctcactgcaagacacgcttcacggt
gtagagacgaagtcgtacagcggcgagcgacgacgctcgcggtcccgcgaacgtgaatcg
cggccgcatcaccgcgcgccgcgacgccgggagcgatccgcgagtcggtaccgcgatcgc
agcagggatagggatgaacgtgatcggtatagggaaaggtcgagggaccgcgatcgtgaa
cgcgaccgtgacgcatattacagggattaccgtgagagggagcgcgatcgttccaggtct
cgcgagcgcgaacgcgcagatcattacaacaggggacacagccgtgaggagaggccccgc
aagtcaccagtagaggccgcagcggaagcgggcgccgcggaagctggtagcaccaagcga
gcggccgcagcgccgtactacgacgagcggtaccgcgagcggcgcgaccgcgagccgccg
cccgccgaccgcgaccgcgaccgcgagcgcgaccaccgccgcgacgcgcgcgaccagcgc
cactga
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