Epargyreus clarus: 140756040
Help
Entry
140756040 CDS
T11494
Symbol
Clp
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
eclr Epargyreus clarus
Pathway
eclr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140756040 (Clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclr03021
]
140756040 (Clp)
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140756040 (Clp)
Transcription machinery [BR:
eclr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140756040 (Clp)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140756040 (Clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCCH_10
zf-CCHC_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
140756040
NCBI-ProteinID:
XP_072947537
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFFSQPGGCNNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGSTCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASTCNKIPPEQREAAQRQEEARYRALGYVKPASESDDMNAQRL
HRMIHKPLEEVTCFKCGNKGHYANKCPKGHLAFLSNHSNQNNNPNAFKKPN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatagttgctaatgtagatcacattaagttcgacatagattacgcgctcgaa
caacagtatggggcgctacctctgccgtttcccggaatggacaaatcaactgcagcagtc
tgtgagtttttcagtcagcctggaggttgtaacaatgggcctcagtgtccctatagacat
gtgaggggggacaggacagttgtgtgtaagcattggcttcgagggctctgcaagaaggga
gaccagtgtgagttcctccacgagtatgatatgtctaagatgcctgaatgctacttctat
gccaggtttaatgcttgccacaacaaggagtgccccttcctccacatagatccggaaagc
aagatcaaagattgtccatggtatgacagaggattctgcagacacggtccgcattgtcgt
cacagacatgtgcggcgtgtcctctgtatgaactatcttgctggcttctgcccagatggc
tccacatgcaagtacatgcatccacggtttgagttgccagcgccacctgaacagacaaag
gatgcaaagaggttgccggtgtgccattattgttcagaagttggccacaaagcttctaca
tgtaacaagattcccccagagcagagggaggcagcacaacgacaggaagaggccaggtat
agagcattaggctatgtgaagcctgcaagcgagtcagacgatatgaacgctcaacgtctg
catcggatgatccacaaacccctggaagaagtcacatgcttcaagtgcgggaataagggc
cactacgccaacaagtgccctaagggccaccttgccttcttatccaaccacagcaaccag
aacaacaacccaaacgcatttaaaaaacctaactag
DBGET
integrated database retrieval system
