Epargyreus clarus: 140757355
Help
Entry
140757355 CDS
T11494
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
eclr Epargyreus clarus
Pathway
eclr03022
Basal transcription factors
eclr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140757355 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
140757355 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclr03021
]
140757355 (Ssl1)
03400 DNA repair and recombination proteins [BR:
eclr03400
]
140757355 (Ssl1)
Transcription machinery [BR:
eclr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140757355 (Ssl1)
DNA repair and recombination proteins [BR:
eclr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140757355 (Ssl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
140757355
NCBI-ProteinID:
XP_072949121
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MADDEPDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAATPRRGPVRLGMM
RHLLVAIDCSEAMSCQDLKPMRFLCTLKLLEKFIEEFFDQNPLSQLGIIAMKNKRAEKVT
ELSGNIRKHVKAVQGMSTVALTGEPSLQNTLELAGRVLRPLPSHASRELLVLFASLTTCD
PGDINTTIQALKTDGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLECTAP
PPRARALDAGLVKMGFPHTAPPAALPDAGSADPPITVCMCHLEEGEGVGGEGHLCPQCRS
KYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELKNEGQAQYCFACLRNFTDLDKQ
IYRCGRCHEYYCWECECAVTISVHVCPGCAARPRLYQRLPDGAAHR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgagccagatccaaaagagtatagatgggaaacaggttatgaaaaaact
tgggaggctatcaaagaagatgaggatgggttggtggaaggcctggtggcagagtttgcg
cagaaggcagcgaggaaggcggctacacctcgccgtggacccgtgcgccttggtatgatg
agacacttactggtggctatcgactgctctgaagctatgagctgccaggatttgaaacct
atgagattcttatgtactttgaagcttctagagaagtttattgaagaattttttgaccaa
aatccattaagtcaattgggtataatagcaatgaaaaacaaaagagctgaaaaagttact
gaactctcaggaaatataaggaagcatgttaaagctgtgcaaggaatgtctacagtagca
ttaactggtgagccatccttgcagaacactctagagctggctggccgagttctgcggcct
ttgcccagccatgcatctagagaactgcttgtcctctttgcatcactcaccacttgtgat
cctggagacattaataccactatacaggcattaaaaacagatggaataaggtgctcagtg
attggattagcagctgaagtaagaatatgcaagaaattatgtcaagacactggtggggaa
tatggggtggtgctggacgacgtgcactaccgctcgctgttgctggagtgcacggcgccg
ccgccgcgggcgcgcgcgctggacgcggggctcgtgaagatgggcttccctcacaccgcg
ccacccgcagcgttgcccgacgccggcagcgcggacccgcccatcaccgtctgcatgtgc
cacctggaggagggcgagggcgtgggcggcgagggccacctgtgcccgcagtgccgcagc
aagtactgctcgctgccggcgcagtgccgcacgtgcggcctcacgctcgcctctgcgccg
catctcgccagatcatatcatcatctatttcctgttgaaccttatgaagaactcaaaaat
gaagggcaggcccaatattgttttgcgtgtttgaggaatttcacagatcttgataaacag
atatatcgttgcgggcgttgccacgagtactactgctgggagtgcgagtgcgcggtgacg
atatcagtgcacgtgtgtcccggctgcgccgcgcgcccgcgcctctaccagcgcctgccc
gacggcgccgcgcaccggtaa
DBGET
integrated database retrieval system
