Epargyreus clarus: 140757366
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Entry
140757366 CDS
T11494
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
eclr Epargyreus clarus
Pathway
eclr03030
DNA replication
eclr03420
Nucleotide excision repair
eclr03430
Mismatch repair
eclr03440
Homologous recombination
eclr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140757366 (RPA1)
03420 Nucleotide excision repair
140757366 (RPA1)
03430 Mismatch repair
140757366 (RPA1)
03440 Homologous recombination
140757366 (RPA1)
03460 Fanconi anemia pathway
140757366 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eclr03000
]
140757366 (RPA1)
03032 DNA replication proteins [BR:
eclr03032
]
140757366 (RPA1)
03400 DNA repair and recombination proteins [BR:
eclr03400
]
140757366 (RPA1)
Transcription factors [BR:
eclr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140757366 (RPA1)
DNA replication proteins [BR:
eclr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
140757366 (RPA1)
DNA repair and recombination proteins [BR:
eclr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
140757366 (RPA1)
MMR (mismatch excision repair)
140757366 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
140757366 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
Motif
Other DBs
NCBI-GeneID:
140757366
NCBI-ProteinID:
XP_072949136
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSYRLSEGSLEVIMNGGHYDKPVMQILGNKKIQGSGANERFRLLVSDGKHSHSFAMLATQ
LNDKLITGELSDNSVVQIDRFVTSLLKNVGRGEKRVMIILDVTVLASGAEVGKKLGNPQN
WTEESAASTSAPAPMRPTAAPAPPKPTPLPSTASGLNSSIISTQMTHPIASLSPYQNKWV
IKARVMNKTPIRTWSNARGEGKLFSMDLCDESGEIRATAFKNECDKFYDMIEVDKVYYIS
RCQLKTANKQFTNLKNDYEMSFNADTVVAECMEDASSVPSINYDFQPINEIANKSPDTIL
DVIGVCKSAGDLQELTARSTGKLLKKREVTLVDSSGGAIVLTLWGNDAEKFDGSTNPVIA
VKGVRLTEFNGSKSLSCLASSMLRLQPDVGEAHRLRGWYDNGGADMDVVNISARAGGYQG
GSGEWLTFAEAEERQLGAGDKGDYFSLLGTLTFTYPDNAVYKACPSDQCNKKLVDQENGL
YRCEKCNREYPNFKYRLLLAANVSDPTGDQRVTAFNEAAEAMLGRTAAEVGAMFEYDKNA
YAALFQDIKFKTFVFKFRTKMENYNDETRLKTTVMNVQPIDYKEANARLIKSIKALSGID
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagattatcagagggatccttggaggtgattatgaatggcggacactacgac
aaaccggtaatgcaaattttgggaaataagaagatacagggcagtggggcgaacgagaga
ttcagattactagtatcagatgggaaacattcccacagcttcgccatgcttgcgacacag
ctcaatgataagctcattacaggagagctatctgataactcagtggtccagatcgatcgc
tttgtcacatcgctgctgaaaaatgttgggagaggagaaaagcgggtcatgataatcttg
gatgtgactgtcttggcatcaggtgccgaagtgggtaagaagctgggcaaccctcagaac
tggacagaggagtcagcggctagtacatcagcaccagcacccatgagacccacggctgca
cctgccccacccaagcccactccactcccttccactgcatcagggttgaacagcagcatc
atatccacacaaatgacccaccccattgctagtcttagcccatatcaaaacaaatgggtg
ataaaagctagagttatgaataagacgccaatccggacttggagcaatgctagaggtgaa
ggcaagctgttcagtatggatttgtgtgatgagagcggtgaaataagggcaaccgcattc
aagaatgagtgtgacaagttttatgatatgattgaggttgacaaagtatactacatcagc
cgatgccagctgaaaactgcaaacaagcaattcacgaacctgaagaatgactatgagatg
tcattcaatgcagacacagtagttgcagaatgcatggaggatgcatcatcagttcccagc
attaactatgacttccaacctatcaacgaaatagcaaataaaagtcctgataccattctc
gatgtaattggagtatgcaaatcagctggagatttacaagagttgacagcaaggagcacg
ggaaaattgctgaaaaaaagggaagtcacacttgtggactcatcaggtggagctattgtc
ttaactttgtggggtaatgatgcagagaagtttgatggcagcactaatcctgttatagct
gttaagggtgtccgcctgacggagttcaacggcagcaagtcgctgtcgtgcctcgcgagc
agcatgctgcggctgcagccggacgtgggcgaggcgcaccgcctgcgcggctggtacgac
aacggcggcgccgacatggacgtcgtcaacatctccgccagggcgggcgggtaccagggc
ggcagcggcgagtggctgacgttcgccgaggcggaggagcggcagctgggcgccggcgac
aagggcgactacttctcgctgctcggcacgctcaccttcacgtaccccgacaacgccgtg
tacaaggcctgcccctccgaccagtgcaacaagaagctcgtcgaccaggagaacgggctg
taccgctgcgagaagtgcaatagagagtaccctaacttcaagtatcgcttgctcttggcg
gcgaacgtatccgaccccaccggcgaccagcgcgtgaccgcgttcaacgaggccgccgag
gccatgctgggccgcacggccgccgaggtcggggccatgttcgaatacgacaagaacgca
tacgcagccttgttccaggatattaaattcaagacgttcgtctttaagttccgcactaaa
atggagaactacaatgatgaaacaagattaaagactacagttatgaatgttcagccgatt
gattacaaagaggccaatgcgaggttaatcaaaagcataaaagccctaagtggtatagat
ttttaa
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integrated database retrieval system
