Epargyreus clarus: 140757485
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Entry
140757485 CDS
T11494
Symbol
Ref1
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
eclr Epargyreus clarus
Pathway
eclr03013
Nucleocytoplasmic transport
eclr03015
mRNA surveillance pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140757485 (Ref1)
09122 Translation
03013 Nucleocytoplasmic transport
140757485 (Ref1)
03015 mRNA surveillance pathway
140757485 (Ref1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140757485 (Ref1)
03041 Spliceosome [BR:
eclr03041
]
140757485 (Ref1)
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140757485 (Ref1)
TREX complex
140757485 (Ref1)
Spliceosome [BR:
eclr03041
]
Complex C
Other components
EJC/TREX
140757485 (Ref1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140757485 (Ref1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
140757485
NCBI-ProteinID:
XP_072949320
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MVDRIDMALDDIIKASKKGRGGGGAGRKFDTKRPGRGGTGFRNGRTGGVLRGRNRGGVSK
PTNYARDNIFQGDVNSTWKHDMFNDFSERKIQRSTPLTTGPTKLLVSNLDFGVSDSDIQE
LFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDGRAMNIQLATSE
INTFRNEERIRPAGGAGGQVRRSVGRGAGGGSRPQTVSRGGRGARRGRGGAGAGAGRGKR
PVPTAEQLDAELDAYVKEIK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggtggatagaattgatatggccttagatgacatcataaaagcaagtaaaaagggtaga
ggaggtggaggtgctggaagaaaatttgatacgaaaagacccgggcgaggtggaactgga
tttcgcaatggtagaacaggcggcgtattgcgaggcagaaatcgtggtggcgtgtccaag
cctacaaattacgcaagggacaacatatttcagggtgatgtaaacagcacatggaaacac
gatatgttcaatgacttcagtgaaagaaaaatacaaagaagcactccattaactacaggc
ccaactaagctcttagtctcaaacttggactttggagtatctgattctgatatacaagag
ctgttttcagaatttggcattttaaagagtgctgctgtacattatgatagatctggcaga
tcattaggaactgctgatgttgtttttgaaagaagagctgatgcattaaaagcgatgaaa
cagtacaatggagtaccacttgacgggcgagccatgaacattcagctggctacttcagaa
atcaacacatttagaaacgaagagagaataagaccagcaggtggagctggaggacaagtg
aggaggagtgttggccgaggagcgggaggaggaagcagacctcaaacggttagcagaggc
ggccgaggtgcaagacgtggacgcggcggcgctggtgctggagcgggacggggcaaacgc
ccagtgcccacagccgaacaattagacgcagaacttgatgcatatgttaaagaaattaag
tga
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integrated database retrieval system
