Epargyreus clarus: 140757984
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Entry
140757984 CDS
T11494
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
eclr Epargyreus clarus
Pathway
eclr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140757984 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclr03400
]
140757984 (DNAlig3)
Enzymes [BR:
eclr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
140757984 (DNAlig3)
DNA repair and recombination proteins [BR:
eclr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
140757984 (DNAlig3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
LIG3_BRCT
RNA_ligase
BRCT_2
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
140757984
NCBI-ProteinID:
XP_072950019
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MADFTPFYVDRAKGSRASCKGCKGNLPSGELRLAKIVASPYGENQQMKSWYHVDCFMNVL
LKQRPATKRIDSIDDIGNWATLTKEDQNFLLKKINELEQVYAQKNDGKYTAKVIKNESNQ
SKIQNIQSSSKDNTDLSVSPVKTEDNKFSTFITLCKNIARVDAYTDKTAVVNKFFTKGSN
GNNYEGDLALWCKFLLPQVSKRVYNLKSRQLVKLFSRIFSTDHDDMLTHLEQGNVADTIQ
HFFTKAKTLQPATDSTLTLQDVDDFLQELSKLTREDEQIYHFKKIVKLCTLNDLKMLIRL
IKGDLRINAGPKHILEGVHPDAYQVFQTSRDLDMVLKRVLPQSAGVKQKGASLNTVQAKL
TLMTPVLPMLAEACKSIEMAMKKCPNGMFSEIKYDGERVQVHKKGDEFKYFSRALKPVMP
HKVSHFKAYLPQAFPKGEDMILDAEVLMVDVNTGKPLPFGTLGKHKQAEFKDAQVCLYVF
DCLYYNGDALIDWPIKKRRSILKENMVEVRNHVMFSEQELIQKPSDLAKMIAKVLQLGLE
GLVLKDLESTYEPGKRHWLKVKKDYLFDGAMADTADLVVLGAWFGSGKKGGMMSVFLMGC
LDTSRNRWVAVTKVHTGHDDSTLERLQKELAPLMIKISQDQTKTPLWLDCNKGLIPDFVA
KDPKKQPVWEITGTELTKSNLHIADGVSVRFPRVTRIRDDKDWKTATNFEELKQLYKTSK
EKTDVSLLTKIAATANDDAPSMKVPKNSPVKRKIDTYFTPKDPKEEKNDRKKRKTGDLNA
STSSDSNSACSTSTISYDDIDATDDQNDILPENPLPDVFKDKRLGFHPDFISFPEFERRH
FERHWIAYGGIVVKSIKRMNVDYLVHRDNEIEFKQMMKLKKCLPSSVKHVTKSWLIKCIN
EVKLCDTTNYTVLLQP
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttacgccgttttacgttgatagagctaagggatcacgtgcctcttgtaaa
ggatgtaaaggtaaccttcctagcggcgaattgcgcctcgctaaaatcgtcgctagtccg
tacggggaaaatcaacaaatgaaatcatggtatcatgtagattgctttatgaatgtgcta
ttaaaacaacgccccgcaaccaaacgtatcgattccatagatgacatcggcaactgggct
acattgacgaaagaagaccaaaatttcctcctcaagaaaattaatgagctggaacaagtg
tatgcccagaaaaatgatggaaaatatacagcaaaagtaattaagaatgaatcaaatcaa
tctaaaatccaaaatattcagagttcaagcaaggacaacactgacttgagtgtgtcccct
gtaaaaactgaggacaataaattttcaacatttataaccctgtgtaaaaatatagcccgt
gtagatgcttacacagataaaactgcagtagttaataagttttttactaaaggctctaat
gggaacaattatgaaggtgatctagcactttggtgtaaatttcttttgcctcaagtgtcc
aaaagggtatataatttaaaaagtaggcaacttgtgaagctgttctctcgaattttcagt
accgatcatgatgatatgttgactcatttagaacagggcaatgtagcagacacaattcaa
catttctttactaaggcaaaaacattacagcctgcaacagacagtactttaactttacag
gacgtggatgactttctccaagagctctctaaactaacaagagaagacgagcagatatat
cattttaagaaaatagtcaaattgtgtacacttaatgacctgaaaatgttgatcagatta
atcaaaggagacttgaggatcaacgctggtcccaaacatatacttgaaggggtgcatcca
gatgcatatcaagtgtttcaaacatcaagagacctcgacatggttttaaagagagtattg
ccacaaagtgcaggagtgaaacagaaaggggcatccctaaacactgtacaagcaaagtta
actctaatgacaccagttcttccgatgctggctgaagcttgtaaatctatagaaatggca
atgaaaaagtgcccgaacggtatgttctctgaaatcaaatacgacggagagagggtccaa
gtacacaaaaagggtgacgagtttaaatatttctcacgtgccttaaaaccagtgatgcca
cataaagtcagccatttcaaagcttacctgccccaagcatttcctaaaggcgaagatatg
atcttggatgcagaggtattgatggttgatgttaatactggtaaacctttaccctttggt
actttagggaaacacaagcaagcggaatttaaagatgctcaagtgtgtttgtatgttttt
gactgtctgtactataatggtgatgcgttaatagactggcctattaagaaacgtcggagt
atattaaaagagaacatggttgaagtcaggaatcatgttatgttttctgaacaggaatta
atccagaaaccatcggatttggcgaaaatgattgcaaaggttctacagttggggttggaa
gggcttgtgttgaaagacctggagtctacatacgagcctggtaaaagacattggcttaaa
gtgaagaaggattacttgtttgatggtgcaatggcagatacagctgaccttgttgtactt
ggagcttggtttggatcaggcaaaaaaggcgggatgatgtctgtatttttgatgggttgt
ttggacacatcaagaaatcgatgggttgcagtgaccaaggtacatacaggtcacgatgac
agtactctagaaaggttgcaaaaggaattagcaccactcatgatcaagatatcccaggat
caaacgaaaactcctctctggttggattgtaacaagggcttaattccagattttgttgcc
aaggaccccaagaaacaacctgtttgggaaatcactggaactgagttgacgaagtccaat
ctacatatagcagatggcgtgtctgttagattccctagagtgacaaggatacgcgacgac
aaggactggaaaacggctacaaattttgaagaacttaaacagttgtataaaacgtccaag
gagaagactgatgtatcgcttctcactaaaattgcggctacagcaaatgacgatgcacca
tcaatgaaggtaccgaagaacagtccggttaaacgaaaaatagatacctattttacccca
aaagatccaaaggaagagaaaaatgataggaagaaaagaaaaactggagatttaaatgct
tctacttcatcggattcaaacagtgcatgcagtacaagtaccataagttacgatgatatt
gatgccactgatgaccagaatgatatattgcctgaaaatccattacctgatgtttttaaa
gataagcgattaggttttcatccagattttattagctttccagaatttgaaagaaggcat
ttcgaaaggcattggatagcatatggtggtattgttgtgaaatcaataaaacgcatgaat
gttgattatttagttcacagagacaatgaaattgaatttaagcagatgatgaaattgaaa
aaatgtttaccatcaagcgttaagcatgttacaaagagttggttgataaagtgcataaat
gaagtgaaactttgtgatactacgaactatacagttttgctacagccatga
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