Epargyreus clarus: 140757996
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Entry
140757996 CDS
T11494
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
eclr Epargyreus clarus
Pathway
eclr03018
RNA degradation
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140757996
09123 Folding, sorting and degradation
03018 RNA degradation
140757996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclr03019
]
140757996
03041 Spliceosome [BR:
eclr03041
]
140757996
Messenger RNA biogenesis [BR:
eclr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140757996
mRNA degradation factors
5'-3' decay
Lsm complex
140757996
Spliceosome [BR:
eclr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140757996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
140757996
NCBI-ProteinID:
XP_072950035
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH
IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggtttagaaaactatgtgaaccaaaccgtatcagtaataacgtcggacggg
cgaaattttatcggcacattgaaaggcttcgaccagacgataaatataattttagatgaa
tcccacgagagagtgttttcgtctacaagtggagtagctcaagtggtgcttggtcttcac
ataattcgcggtgataatgtcgcgatagtgggacaaatagacgaatcgatcgatagcaga
ttggacctggggaacatcaaagcagaacccttaggatctatagtacactga
DBGET
integrated database retrieval system
