Enterobacter roggenkampii 35734: LI67_005075
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Entry
LI67_005075 CDS
T04878
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03030
DNA replication
ecls03430
Mismatch repair
ecls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI67_005075 (dnaE)
03430 Mismatch repair
LI67_005075 (dnaE)
03440 Homologous recombination
LI67_005075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecls03032
]
LI67_005075 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecls03400
]
LI67_005075 (dnaE)
Enzymes [BR:
ecls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI67_005075 (dnaE)
DNA replication proteins [BR:
ecls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI67_005075 (dnaE)
DNA repair and recombination proteins [BR:
ecls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI67_005075 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKZ72125
UniProt:
A0A167PWJ4
LinkDB
All DBs
Position
1:918779..922261
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLIGDELTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKSLLRGNSALVDQCVSFYEEYFPNRYYLELIRTGRQDEES
YLHAAVALAEERGLPVVATNDVRFLEAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcgaagaccgggccgctggtaaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttctacggaacggcgcacggcgcg
gggatgaagccgatcgtcggcgcagacttccacgtgcagagcgacctcatcggggatgaa
ctgacgcaaatctccgtgctggcgatgaacaacacgggttaccaaaacctcacacttctg
atctccaaagcctatcagcgcggttacggcgcgctgggaccgtggatcgaccgcgactgg
ctggctgaactgaacgaagggctgctcctgatctcaggcggccggatgggggacgtcggc
aaatccctgctgcgcggtaacagcgcgctggtggatcaatgcgtctcgttctatgaagaa
tatttccctaatcgttattacctggagttgatccgtaccggccgtcaggatgaagagagc
tatcttcatgccgcggtggcgctcgcagaagagcgcgggttgcccgtagtggccaccaac
gacgtgcggttccttgaggcgggcgattttgacgctcacgaaattcgcgtggcgatccac
gatggctttaccctcgacgatccgaagcggccgcgtaattactccgcacaacagtacatg
cgcagcgaggaggagatgtgtgagctcttctccgatatccccgaagcgctggaaaacagc
gtagagatcgccaagcgctgcaacgtcaccgtccgacttggcgaatacttcctgccgcag
ttcccgacgggtgacatgactacggaagatttcctggtcatgaaatcgaaagaaggtctg
gaagagcgtctggaattcctgttcccggatgaagaagagcgtaaaaagcgtcgtccggag
tatgacgaacgcctggacattgaactccaggtgatcaaccagatgggcttcccgggctac
ttcctgatcgttatggagttcatccagtggtcgaaggataacggcgtgccggttggaccg
ggccgtggttccggtgcaggctcgctggtggcgtacgcgctgaaaattaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtctcgatgccc
gacttcgacgttgacttctgcatggagaaacgtgaccaggtgatcgagcacgtggccgat
atgtacggccgtgatgcggtatcgcagatcattaccttcggtacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctgggccacccgtacgggtttgtcgatcgcatctct
aaactggtgccgcccgatccgggcatgacgctggcaaaagcctttgaggctgaaccgcag
ctgccggaaatctatgaagcggacgaagaggtcaaagcgctgatcgacatggcgcgcaag
cttgaaggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaatcaccgacttcgcgccgctgtattgcgatgaagcgggccagcatccggtcacccag
ttcgacaagaacgacgtagaatacgccgggctggtgaagttcgacttccttggcctgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgccgcgagaagaacggc
gagccgccgctggatatcgcggccatcccgctggacgacaagaaaagtttcgacatgctg
cagcgctcggagaccaccgccgtcttccagcttgaatcccgcggcatgaaagatctgatt
aaacgtctgcagcccgactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
ggcccgctgcagtcagggatggtagataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggacgttcagtggcagcacgaaagcctgaagccggtactggagccaacc
tatggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtgctttccggctat
acgctcggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttccatctttgaagacggggcgaagaaaaacggcgtcgacggcgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatctcac
tcagccgcctatgctttggtgtcgtatcaaacgctgtggctgaaggcgcactatcctgcg
gagtttatggctgcggtaatgaccgccgatatggacaacaccgagaaggtggtgggcctg
gtggatgagtgctggcgcatggggctgaagatcctgccgccggatattaactcaggtctc
taccatttccacgtcaatgacgacggggagatcgtttacgggatcggcgcgatcaagggc
gtgggcgaggggccgatcgaggcgatcatcgaagcgcgcaacaacggcgggtatttccgc
gagctgttcgatctttgcgcccgtaccgataccaaaaagctgaaccgccgcgtgctggaa
aaactgatcatgtccggcgcgttcgacaggctggggccgcaccgcgccgcgctgatgaac
tcgctgggcgacgccctgaaagcggcggatcaacacgcgaaagcggaagccattggccag
gcggatatgttcggggtgctggcggaagagccggagcagattgaacagtcgtattccaac
tgccagccgtggccagaacaggtggtgctggacggcgagcgtgaaacgttaggtttgtac
ctgacgggtcacccgatcaaccagtacattaaagaaattgagcgctatgtcggcggccac
aggctaaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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integrated database retrieval system
