Enterobacter roggenkampii 35734: LI67_005725
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Entry
LI67_005725 CDS
T04878
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ecls
Enterobacter roggenkampii 35734
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecls03400
]
LI67_005725
DNA repair and recombination proteins [BR:
ecls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LI67_005725
Archaeal homologous recombinant proteins
LI67_005725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
EAD11
nSTAND3
COG5_N
ABC_tran
nSTAND_NTPase5
cobW
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKZ72245
LinkDB
All DBs
Position
1:complement(1048614..1051745)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQAQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCE
DGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVFEKHKAARSVLEKCEAQAAGVVLLSEEQQQQLQQSLQALTDAEKTLLEQQQ
NQQKHFQWLTRHDELVREQQRVAAMQQQAQQALTDAAPELAKLQLALPAAQLRPLWEHQQ
EQTARLAQTQQRIIEVNTRLQARTALRSRIRNTALRNHEQLQTELTALAQWLAEHERYRL
LGQEIAGWRAQFSQLNRDKTQLASLAARIGELRNRLAAMPENALTLTADEVSAAMEQQSR
SRTLRQQLTSLHARYQPLQKRLRQSSESVQKAQAEQNKLNETLTLRRQQYKEKNQHYLDL
KALCETEATIKKLEHYRSQLEAGKPCPLCGSCEHPAVEQYQSLELTDNQRRRDALEKEVA
ALKEEGLLVLGQVNALTQQIQRETDDAQTLSQEEQALTKEWVAACTSLNITLNIQDDIAP
WLNEQEQYERQLYQLSQRLTLQNQLNEQDAQERQYQQQLAATRQALEHALLALSLNAPEE
GQEAAWLQAREAEFAQWQKKQTQHGVLQERINALKPLLDALPAANSEDAEPVIPDNWRAI
HDECVSLRSQLTAQQQQEALERERLQQSQTQFTAARSASCFADQDAFLAALLDDDAIRHL
EQLKQSLENQIQQAAALSGQANQQLQSHLALRPEGLDADAATLQIQLQQLAQQLRENTTH
QGEIRQQLKQDSDNRQHQLALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLD
NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSKLDKEFAVQ
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctgcgcctgaaaaatctcaactccctcaagggcgagtggaaaatt
gactttaccgctgagccgtttgccagcaacgggctgtttgccatcaccggcgcgaccggg
gcaggtaaaaccaccctgctcgacgccatctgtctggcgctttatcacgaaacgccgcgc
ctgaataaagtctcccaggcgcaaaatgacctgatgacccgcgacaccgccgaatgtctg
gcggaagtggagttcgaggtaaaaggcaccgcctatcgcgccttctggagccagaaccgg
gcgcgcaaccagccggacggtaacctgcaggcgccgcgcgtggagctggcgcgctgcgaa
gatggcaaaattctggccgacaaagtgacggataagctggagcaaaccgccgcgctcacc
gggctggactacgggcgctttacccgctcgatgctgctctctcaggggcagtttgccgcc
ttccttaatgccaaaccgagcgatcgcgccgagcttctggaagagctgaccggcaccgaa
atctacggtcagatttccgccatggtgtttgagaaacacaaagcggcccgcagcgtgctt
gaaaagtgcgaggcgcaggcggcgggcgtcgtgctgttgagcgaagaacaacagcagcag
ttacagcaaagtttgcaggcacttactgacgcagagaaaaccctgctggaacagcagcaa
aaccaacagaaacattttcagtggcttacgcgccatgatgagctcgtgcgcgagcaacag
cgcgtcgccgcgatgcagcagcaggcgcaacaggcgctgacggacgctgcgcctgagctg
gcaaagctccagctcgctctacccgccgcccagcttcgcccgctctgggagcatcagcag
gagcaaaccgcgcgtctggcacaaacgcagcagcgaattatcgaagtaaatactcgctta
caagccagaaccgcgctgcgttcgcgtattcgcaataccgccctgcgtaaccacgagcag
cttcagaccgaactgacggcgctggcgcagtggctggcggagcacgagcgctatcgcctg
ttgggccaggagattgcaggctggcgcgcccagttctctcagcttaaccgtgataaaacg
cagttagcctcgcttgctgcgcggataggtgaattacgcaacaggctggctgcgatgccg
gaaaacgcgctgacgctgacggcggatgaggtcagtgcggccatggagcagcagtccagg
tcccgcacgctgcgccagcagctgacgtcgctgcatgcccgctatcagccgctgcaaaag
cgcctgcgccagagcagtgaaagcgtgcagaaggcgcaggccgaacaaaataaactcaat
gaaacgctgacgctgcgccgccagcagtacaaagagaaaaaccagcactatctcgacctg
aaagctctgtgcgaaaccgaagcaacaatcaagaagctggagcattaccgttcgcagctt
gaggcgggtaaaccctgcccgctgtgcggttcctgtgaacatcccgccgttgagcaatat
cagtcacttgagctgacggataaccagcgccgccgtgatgccctggaaaaagaggtcgcc
gcccttaaagaggaaggcctgctggtgctgggacaggtcaatgccctgactcagcagatc
cagcgcgagacagacgacgcgcagacgctttctcaggaagagcaagcgctcactaaagag
tgggtggcagcctgcacgtccctgaacattaccttgaatattcaggacgatatcgcgcca
tggctgaacgaacaggaacagtacgagcgccagctttatcagctcagtcagcgtctcacc
ctgcagaaccagctcaacgaacaggacgcgcaggagcggcagtatcagcagcagctggcg
gccacgcggcaggcgctggaacatgccctgctcgcgctctcgcttaacgcacctgaagag
ggtcaggaagccgcctggcttcaggcccgcgaagcggaattcgcgcagtggcagaagaag
caaacgcagcacggcgtgcttcaggaacgcataaacgccctgaagccgctgctcgacgcg
cttccggcagcgaacagcgaagacgccgaaccggttattcctgataactggcgcgccatc
cacgacgagtgcgtgtcgctgcgaagccagctgaccgcgcaacagcagcaggaagcgctg
gagcgagagcgcctgcagcagtcgcagacgcagttcaccgcggcgcgctcggcgagctgc
tttgccgaccaggacgcgtttcttgccgccctgctggatgacgacgctattcgccacctt
gaacagctgaaacagtcgctggaaaaccagatacagcaggccgcggcgctgtccgggcaa
gcgaaccagcagctgcagtctcatctggcactgcggccggaagggctcgatgccgatgcc
gccacgctgcaaatccagctgcagcagctggcgcaacagctgcgcgagaacaccacgcat
cagggcgagatccgtcagcagcttaagcaggacagcgataaccggcagcaccagctggcg
ttgatgcagcaaattgaagaggccgcgcgccaggcggatgactggggttatctgaacgcg
ctgatcggctccagcaccggcgacaagttccgtaagttcgcccaggggctgacgctggac
aatcttgtctggctcgcaaaccagcagcttaaccgcctgcacggacgttacttattgcaa
cgtaaggccagcgacgcgctggagctggaagtggtggatacgtggcaggcggatgcggtc
cgcgatacccgcaccctctccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgctttccgacctggtaagtcataaaacgcggatcgattccctgttcctggatgaaggg
ttcggcacgctcgacagtgagacgctggataccgcgctggatgcgctcgacgcgctgaac
gccaccgggaaaaccattggcgtgatcagccacgtagaggcgatgaaagagcgtattccg
gtgcagatcaaagtgaagaagattaacgggctggggtacagcaagctggataaagaattt
gccgtgcagtaa
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integrated database retrieval system
