Enterobacter roggenkampii 35734: LI67_019265
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Entry
LI67_019265 CDS
T04878
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LI67_019265 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecls03400
]
LI67_019265 (recD)
Enzymes [BR:
ecls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LI67_019265 (recD)
DNA repair and recombination proteins [BR:
ecls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LI67_019265 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
MukB
T2SSE
NPHP3_N
ATPase
SRP54
UvrD_C
CbiA
DO-GTPase1
DEAD
NTPase_1
Glyco_transf_9
AAA
Motif
Other DBs
NCBI-ProteinID:
AKZ74797
UniProt:
A0A837LCF5
LinkDB
All DBs
Position
1:complement(3898501..3900321)
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AA seq
606 aa
AA seq
DB search
MTMQALLLDAVEQRLLRHLDVQFAMMVAGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVD
EKMPPALQACFALLGDALDWQAILRGSPAVSGADTGTPMILVGERLYLNRLWRNELTVAR
FFSETNAPLPCDETQLRQTLDALFSSDEATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIKLSGEQKCRIRLAAPTGKAAARLTESLGGALQKLPLTGEQLALFPNEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTYASLGYTAERAQELARLTGCSLTSENHSLAGALRDSLCLLQKSYRF
GSDSGIGHLAAAVNRGDRRTTTAVFDGTFTDIEKKSLQTGEEYQAMLDDALQGYQHFLTG
VQQQRPPEQVIAAFGEYQLLCALREGPFGVRGLNDRLEQLLVQKRKINRTPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDCGQGLRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVITRELIYTAITRARQRLSLYTDERVLVQAIATRTERRSGLG
AIFESL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggcgctactgctggacgcggttgaacaacgattactgcgccacctggac
gtgcagtttgccatgatggtggcaggcgaggagccagccgtcatgcttgccgccgcgatt
ctgagcaaagacgcgggggaggggcacgtatgcctgccgctgtcgcgtctggcggtggat
gagaaaatgccgccggctttacaggcgtgtttcgcgctgctgggtgacgcactggactgg
caggcgatactacgcggttcgcctgccgtgagcggagccgataccgggacgccaatgatt
ctggtcggcgagcgtttgtatcttaaccggctgtggcgtaacgaactgacggtggcgcgc
ttcttcagcgagaccaacgccccgcttccctgcgatgaaacgcagctcaggcaaacgctg
gatgcgctgttttcctctgacgaggcgacagactggcagaaagtggcggcagccgtggcc
ttaacgcgccggatctcggtgatttcaggcggaccgggcaccgggaaaacgaccaccgtg
gcaaaactgcttgccgcgctgattaagctctcgggtgagcaaaagtgccgtattcgcctg
gcggcccccaccggtaaagccgcggcgcgtctcacggaatcgttaggcggcgcgctgcaa
aagctgccgcttaccggggagcagctggcgcttttccccaacgaagccagcacgctgcac
cgtttgcttggtgctcagcctggcagccagcgtctgcgctaccatgccggtaatcccctg
cacctggatgtgctggtggtggatgaggcgtcgatgattgacctgacgatgatgtcgcgt
ttgattgatgccctaccgccgcacgcgcgcgttattttcctgggcgatcgagaccagctt
gcctccgtggaggcgggggctgtgctgggcgatatctgcacctatgccagcctgggatat
accgcagaacgcgctcaggagttagcccgtctcaccggatgctcgctcacctctgaaaac
cactcgcttgcaggggcgctgcgcgacagcctgtgtctgctgcagaaaagctaccgcttc
ggcagcgattccggtatcggccatcttgcggcggctgtgaaccggggcgaccggcgcaca
accactgcggtgtttgacggcacctttacggatattgagaaaaaatcgctgcagaccggg
gaagagtatcaggcgatgctggatgatgccctgcaggggtatcagcactttctgacgggc
gtacaacagcagcgtccgccggagcaggtcattgccgcatttggtgaatatcagctgctc
tgtgcgctgagggaaggtccctttggtgtccggggcctgaacgacaggctggaacagctg
ctggtgcaaaagcgtaaaataaaccgcaccccgcactcgcgctggtatgaagggcgaccg
gtgatgatttcccgcaacgacagcgcgctggggttgtttaacggggatatcgggattgcg
ctcgactgcggccaggggctgcgcgtctggttccagatgccggacgggagcgtgaagtct
ttccagcccagccgtttgcccgagcatgaaaccgcctgggcgatgacggtgcataagtcc
cagggctccgagtttaaccacgcggcgctgatcctgcccacgcagctttcccccgtcatt
acccgcgagctgatctataccgccattacgcgcgcgcgtcagcgcctgtcgctgtatacc
gatgaacgcgtgctggtgcaggcgattgccacccgcacggaacgccgaagcgggctgggc
gcgatatttgagtccctctga
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