Enterobacter roggenkampii 35734: LI67_023400
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Entry
LI67_023400 CDS
T04878
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI67_023400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecls03019
]
LI67_023400
03400 DNA repair and recombination proteins [BR:
ecls03400
]
LI67_023400
Enzymes [BR:
ecls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI67_023400
Messenger RNA biogenesis [BR:
ecls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LI67_023400
DNA repair and recombination proteins [BR:
ecls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LI67_023400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AKZ75592
UniProt:
A0A0F1DAZ3
LinkDB
All DBs
Position
1:complement(4752442..4754271)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLQGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccctggccaggaaaccatcattgaaacggtgctgcaaggc
cgtgactgtctggtggtgatgccgaccggcggcggtaagtccctctgttatcaggtgccc
gcgctggtgcttaacggcctgacggtcgtggtatccccgctcatttcgctaatgaaagac
caggttgaccagctgctcgccaacggcgtcgcggcggcctgtctgaactcgacgcaaacc
cgggagcagcagcaagaggtgatggccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccggaacgcctgatgctggataacttcctcgaccatctcgcgcactggaatccg
gttctgctggcggtggatgaagcacactgtatctcccagtggggacacgatttccgcccg
gaatacgccgccctcggccagctgcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggatgacaccacgcgcctggatatcgttcgcctgctggggttgaacgac
ccgtatattcaggtcagcagcttcgaccgtccgaacatccgctacatgctgatggaaaaa
ttcaagccgctggatcagctcctgcgctacgtccaggagcagcgcggcaagtccggcatc
atctactgcaacagccgcgcaaaggtggaagacaccgctgcgcgtctgcaaaaccgtggc
tttagcgcggcggcataccatgccgggttagagaaccacatccgcgccgacgtgcaggaa
aaattccagcgcgacgacctgcaaatcgtcgtcgcgacggtggcgttcgggatggggatc
aacaagcccaacgtgcgctttgtggtgcacttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggtcgcgccgggcgtgacggtctgcctgcagaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgtctggaagagaagccgcagggccagctg
caggatatcgagcgccacaagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgtcgtctggtgctgctcaactactttggtgaaggacggcaggagccgtgcggtaactgc
gatatctgcctggatcccccaaaacagtacgatggcctgatggacgcgcgtaaggcgctc
tcgaccatttaccgcgtgaaccagcgcttcgggatgggctacgtggtggaagtgctgcgc
ggtgccaacaaccagcgtatccgcgacatgggccacgacaagctgcctgtctacggtatt
ggcaaggaccagagccacgagcactgggtcagcattattcgtcagctgatccacctcggc
tttgccacacagaacattgctcagcactccgcgcttcagctgaccgaagcggcgcgtccg
gtgctgcgcggtgacgttgaactgaagctcgccgtgccgcgtgtggtcgccctcaagccg
cgcgtgatgcagaaatcctacggcggcaactacgaccgcaagctgttcgccaaactgcgc
aagctgcgtaaggccatcgctgatgaagagaacatcccgccatacgtggtgttcaacgac
gcgacgctcattgagatggccgagcagatgccgctcagcgccagcgaaatgctcagcgtt
aacggcgtcggtacgcgcaagctggagcgcttcggtaaagagtttatggcgctcatccgt
tcccacgttgatggtgatgatgaggagtag
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