Enterobacter roggenkampii 35734: LI67_023425
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Entry
LI67_023425 CDS
T04878
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03420
Nucleotide excision repair
ecls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LI67_023425 (uvrD)
03430 Mismatch repair
LI67_023425 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecls03400
]
LI67_023425 (uvrD)
Enzymes [BR:
ecls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI67_023425 (uvrD)
DNA repair and recombination proteins [BR:
ecls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LI67_023425 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LI67_023425 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
AKZ75597
LinkDB
All DBs
Position
1:complement(4758201..4760363)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAASRTNLLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSFGNPVEQTWQNVYKAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISIYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQVGMPYRIYGGMRFFERQEIKDALSYLRLIANPNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQACRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQRMG
SPIAETDTGYKLGQRVRHSKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgacgcggttgccgcc
tcgcgcaccaacctgctggtgctggctggagcgggcagtggtaagacgcgcgtgctggtt
caccgtatcgcctggctgcagagcgtggaaaactgctcgccgtactccatcatggcggtc
acgtttaccaacaaggcggcggcggagatgcgccaccgcatcgcgcagctgatgggcacc
agccagggcgggatgtgggttggcaccttccacggtctggcgcaccgcctgctgcgtgcg
caccacatggacgccaacctgccgcaggatttccagatcctcgacagcgaagaccagctc
cgtctgctgaagcgcctgatcaaggcgatgaacctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggtcagaaagacgaggggctgcgcccgcaccacattcag
agcttcggcaacccggtcgagcagacctggcagaacgtctacaaggcctatcaggaagcg
tgcgatcgcgccggcctggtggatttcgccgagctgctgctgcgcgctcacgagctgtgg
ctcaacaagccgcacatcctgcagcactaccgtgaacgcttcaccaacattctggtggac
gaattccaggataccaacaacatccagtacgcgtggatccgcctgctggccggtgatacc
ggcaaggtgatgatcgtgggcgatgacgatcagtccatctacggctggcgaggcgcgcag
gtggaaaacattcagcgcttccttaacgacttccccggcgccgaaaccatccgtctggag
cagaactaccgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaagctgtggaccgacggcgtcgacggcgaaccgatttcgatt
tactgcgccttcaacgagctcgacgaagcgcgcttcgtggtcaaccgcatcaaaacctgg
caggacaacggcggcgcgctggagcagtgtgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggtggggatgccgtaccgcatttacggcggtatg
cgcttcttcgaacgtcaggaaatcaaagatgcgctctcgtatctgcgtctgattgccaac
cctaacgacgacgcggcgtttgaacgcgtggtcaacacgccgacccgcgggattggcgac
cgtacgctggacgtggtgcgtcaggcctcgcgcgaccgtcagctgacgctgtggcaggcg
tgccgcgagctgctgcaggaaaaggcccttgccggacgcgcggccagcgccctgcagcgc
ttccttgaactgattgacgccctggcgcaggaaaccgccgacatgccgctgcatgtgcag
accgaccgggtgattaaagactccggcctgcgcaccatgtacgagcaggaaaaaggcgag
aagggccagacccgtattgagaacttagaggaactggtcacggcaacgcgccagttcagc
tacaacgaagaagacgaggacctgatgccgctgcaggcattcctctcccacgccgcgctg
gaagcgggggaagggcaggcggacacctggcaggatgcggttcagctcatgacgctgcac
tccgccaaaggtctggagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggcggacgtctggaagaggagcgtcgtctggcttac
gtgggcgtgacgcgagcgatgcaaaagctgacgctgacctatgctgaaacccgccgtttg
tatggcaaagaggtctatcaccgtccgtcgcgctttatcggtgaactgccggaagagtgt
gtcgaagaggtacgtctgcgggcgagcatcagccgtccggtcagccatcagcgcatgggc
tcgccgattgcggaaaccgacaccggctacaagctgggccagcgcgtgcgccattcgaag
tttggcgaaggcaccattgtgaatctggaaggcagcggcgagcacagccgcctgcaggtg
gcgttccaggggcaggggattaaatggctggtggccgcctacgcgaagctggaaacagtc
taa
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