Candidatus Enterococcus clewellii: A5888_002449
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Entry
A5888_002449 CDS
T11907
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eclw Candidatus Enterococcus clewellii
Pathway
eclw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eclw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A5888_002449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclw03021
]
A5888_002449
03400 DNA repair and recombination proteins [BR:
eclw03400
]
A5888_002449
Enzymes [BR:
eclw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A5888_002449
Transcription machinery [BR:
eclw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A5888_002449
DNA repair and recombination proteins [BR:
eclw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A5888_002449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WYJ90692
UniProt:
A0A242K569
LinkDB
All DBs
Position
complement(2566969..2570622)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIDAGDTGLEKKQLLTEREYREKRDQYGQGFSAAMGAEAIKQLLD
AVDPDSEVTSLKEELKTAQGQKRTRAIRRLDILEAFRASGNLPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMRVLVQREIATNIKNAKRKIERGEDEVWDILEEVIQEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEDREGEGMVFRDMNEAVLAWRNGYVHLHSRIGVQ
TTLLGDKPFTDWQKERLLITTVGKIIFNEIMPIEFPYLNEPTDYNLTVQTPDKYFVEAGT
DVPTYIKEQELVLPFKKKNLGNIIAEVFKRFHITETSKMLDRMKDLGYKHSTHAGITVGI
ADISVLSEKEEIIDTAHKQVETITKQFRRGLITDDERYERVIAVWNGAKDEIQLKLIESM
DAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEIAAIKEGNEIIEALE
ERLLGRYTRKAILNPETKDVIIGADELITEDIAKEIVDAGVEKVTIRSVFTCNTKHGVCK
HCYGRNLATGSGVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGQAVITEVTGEVIDISEDPATRQKEVTIKGKTDTRTYTVPYTARMKVAEGDTIH
RGEPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDTEILPGTLLDIAEFKDRNYDTLVAGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVKVASENVYSIS
DIEAQMAAEDALNELNK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgagagcatgcagatcggcttagcttcgcctgagaagatc
agaagctggtcgtacggggaagtaaaaaaacctgaaacgattaactatcgtactcttaag
cctgaacgtgaaggcttgttctgtgaacggattttcggtcctaccaaagactgggaatgt
gcttgtggaaaatataaacgtattcgttacaaaggtatcgtctgtgaccgatgtggtgta
gaagtgactcgttctaaagttcgtcgtgaacgtatgggtcatatcgaattagctgcacct
gtttcacatatctggtacttcaaaggtattccgtctcgtatgggtcttgttttagatatg
agtccccgtgcgctggaggaaatcatctattttgcttcttatgttgtaatcgatgcaggc
gatacaggcttggagaaaaaacaactgctgacagagcgtgagtatcgtgaaaaacgtgac
cagtatggtcaaggattctcagctgcaatgggtgcagaagcaatcaaacagttactagat
gctgttgatcctgatagtgaagttacttcattgaaggaagagctgaaaacagctcaagga
caaaagagaacacgtgcaatccgccgtttggatattctggaagcgttccgcgcctctggc
aatctgccgagctggatggtcatggatgttatcccagttattcctccggatcttcgtccg
atggttcaattggaaggtggacgttttgcaacaagtgatttgaacgacttataccgtcgt
gtaatcaaccgtaacaaccgtctgaaacgtctattggatctgaatgcaccaagtatcatt
gttcaaaatgaaaaacggatgcttcaagaagcggttgatgcgttgatcgataatggtcgt
cgtggtcgtcctgttactggaccgggtaaccgtccattgaaatctctttctcatatgttg
aaagggaaacaaggacgtttccgtcagaacttgctaggtaaacgtgttgactattctggt
cgttcagttatcgtagtaggaccaaacttgaagatgtatcagtgtggtctaccgaaagaa
atggcgatcgagctgttcaaaccattcgttatgcgtgtattggttcaacgcgaaattgca
acgaatatcaagaatgcaaaacgtaaaattgagcgtggtgaagatgaagtatgggatatt
ctggaagaagttattcaagaacatccagttttactgaacagggcacctacattgcacaga
ctgggtatccaagcatttgagccagtattggtcgaagggcgtgctattcgtctgcatcca
ttggtttgtgaagcgtataatgccgatttcgatggagaccaaatggcggtccatgtaccg
ttgaatgaagaagctcaagcagaagcacgtatgctgatgctagctgctcaaaacatcttg
aatccgaaagatggaaaaccagttgtaacaccgtctcaggatatggtcttgggtaactac
tacttgacgatggaagaagaagatcgtgaaggtgaaggtatggtcttccgtgatatgaac
gaagctgtactggcatggcgtaatggttatgtccatctacattctcgtatcggtgttcaa
acaacgttattgggtgacaaaccgtttacagactggcaaaaagaacgtctgttgattact
actgtagggaagattattttcaatgagatcatgcctatagagttcccttacttgaatgaa
ccgacagattacaacttgactgttcagacaccggataaatactttgtggaagctggaaca
gatgtcccaacttacattaaagagcaagaactggttctgccgttcaagaagaaaaacctt
ggaaatatcattgcagaagtcttcaagagattccatatcactgaaacttctaaaatgctt
gaccgtatgaaagaccttggatacaagcattctacgcatgccggtattaccgttggtatc
gctgatatcagtgttcttagtgaaaaagaagaaattattgatacagcacataaacaagta
gaaacaattacgaaacaattccgccgtggtctaattacagatgacgagcgttatgaacgt
gttattgctgtttggaacggtgcaaaagacgagatccagttgaaactgattgaaagtatg
gatgcaaaaaatccaatcttcatgatgtcagattccggagcccgtggtaacatctccaac
tttactcagcttgctgggatgcgtggattgatggccgcaccaaacggacgtatcatggaa
ttgccgatcatctcgaatttccgtgaaggactatctgtcttggaaatgtttatctctacc
catggagcccgtaaagggatgaccgatacagccttgaagacagccgattcaggttacctg
actcgtcgtctggttgatgtggcacaggatgtaatcattcgtgaggacgactgtggaaca
gatcgtggtctggaaatcgcagcaatcaaagaaggcaatgaaatcatcgaagcactggaa
gaacgtctgttgggtcgttatacgcgtaaggctattctaaaccctgaaacaaaagacgtg
atcatcggtgcggatgaattgattacagaagatattgcgaaagaaatcgttgatgctggt
gttgaaaaagtaacgattcgttccgtatttacatgtaacacgaagcatggtgtatgtaaa
cactgttacggacgtaacttggcaactggttcaggcgttgaagtcggagaagcagttggt
acgattgccgctcagtctatcggagaaccaggtacacagcttacaatgcgtacattccat
accggcggggttgccggggacgatatcactcaaggtctgccccgtgtacaggaaatcttt
gaagcccgtaatccgaaaggtcaagcggtcatcacagaagttaccggtgaagttatcgat
atttctgaagatcctgcaacacgtcaaaaagaagtaacgatcaaagggaaaacagatact
cgtacgtatactgttccatatactgcccgcatgaaggtggcagaaggagatacgatccac
cgtggtgagccgttgacagaaggatcgatcgatccgaagcaattgcttcaggttcgcgat
gttttatcagtggaaaactacctgctgcgtgaagtacaacgtgtttaccgtatgcaaggg
gtggaaatcggcgataagcatatcgaggtaatggttcgccaaatgcttcgtaaagtccgt
gtcatggacccaggtgatacagaaatcttgccgggaacattattggatattgctgaattt
aaagaccgtaactacgatacattggtagccggtggcgttcctgcgacaagtcgtccagta
ttacttggtatcacgaaagcctctctggaaacgaacagcttcttatctgctgcgtccttc
caggaaacaactcgtgtactgacagatgctgcgattcgtgggaagaaagatcctctgctt
ggtttgaaagaaaatgttatcatcggtaagatcatccctgctggtacaggtatggctcgt
taccgtaacatggaaccaaaagaggtgaaggtagctagcgagaatgtgtacagtatctct
gatattgaagcgcagatggctgcagaagatgcattaaatgagttgaataaataa
DBGET
integrated database retrieval system
