Enterobacter hormaechei subsp. xiangfangensis 34399: LI66_04145
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Entry
LI66_04145 CDS
T03707
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eclx
Enterobacter hormaechei subsp. xiangfangensis 34399
Pathway
eclx03030
DNA replication
eclx03430
Mismatch repair
eclx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eclx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI66_04145 (dnaE)
03430 Mismatch repair
LI66_04145 (dnaE)
03440 Homologous recombination
LI66_04145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eclx03032
]
LI66_04145 (dnaE)
03400 DNA repair and recombination proteins [BR:
eclx03400
]
LI66_04145 (dnaE)
Enzymes [BR:
eclx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI66_04145 (dnaE)
DNA replication proteins [BR:
eclx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI66_04145 (dnaE)
DNA repair and recombination proteins [BR:
eclx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI66_04145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJB80588
LinkDB
All DBs
Position
885044..888526
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GLKPIVGADFHVQSDLLGDEMTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNNALVDQCVSFYEEYFPDRYYLELIRTGRADEES
YLHAAVALAEARGLPVVATNDVRFLEAGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKKGL
EERLEFLFPDEAVRKEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcaaagaccgggccgctggtaaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcatggcgca
ggattaaagcccatcgtcggtgcggattttcatgtgcagagcgacctgctcggcgatgag
atgacgcaaatttccgtgttagccatgaataacacgggctatcagaacctcactctgctg
atctcaaaagcctaccagcgcggctacggcgcactgggcccatggattgaccgcgactgg
ctggcagagctgaatgaaggtttgctgctgatctccggtggtcgtatgggggatgtcggc
aaatgtctgctgcgcggtaacaacgcgctggtggatcagtgcgtctcgttctacgaagag
tatttcccggatcgctattacctggagctgatccgtaccgggcgtgcggacgaagagagc
tatctgcatgcggccgtcgccctggcggaagcgcgtggcctgcctgtagtggccaccaac
gatgtgcggttccttgaggcgggcgattttgacgcgcatgaaattcgcgtcgctatccac
gacggcttcaccctcgacgatccgaaacgcccgcgcaactactcatcgcagcagtacatg
cgcagcgaagaggagatgtgtgagcttttctcggacatcccggaagcgctggaaaacagc
gtagagattgccaagcgctgtaacgtcaccgtgcgtctcggcgaatacttcctgccgcag
ttcccgacgggcgacatgaccaccgaagatttcctggtcatgaaatcgaaaaagggtctg
gaagagcgtctggaattccttttcccggatgaagcggtccgtaaagagaagcgtcctgaa
tatgacgagcgcctggatattgaactccaggtgatcaaccagatggggttccctggctac
ttcctgatcgtgatggagttcatccagtggtcgaaggataacggcgtgccggtaggcccg
ggccgtggttccggtgccggctcgctggtggcgtacgcactgaaaatcaccgacctcgat
ccgttggaattcgacctgctgttcgaacgtttcctcaacccggaacgtgtctccatgccc
gactttgacgtcgacttctgcatggaaaaacgcgaccaggtgattgagcacgtggccgat
atgtacggtcgtgatgcggtttcacagatcattaccttcgggacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgttctgggccacccgtacggttttgtcgatcgtatctct
aagctggtcccgcccgatccgggcatgaccctggcgaaagcctttgaagccgaacctcag
ctgccggaaatctacgaagccgacgaagaggtgaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaatcaccgacttcgcgccgctgtactgcgatgaagcgggccagcatccggtcacccag
ttcgacaagaacgacgtggaatacgccgggctggtgaagtttgacttcctcggcctgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgtcgcgagaagaacggc
gaaccgccgctggatatcgcggctatcccgcttgatgacaagaaaagtttcgacatgctg
caacgctcggagacgacagccgtcttccagcttgaatcccgcggcatgaaagatttgatt
aagcgtctgcaaccagactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
gggccgttgcagtcggggatggtggataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggacgtgcagtggcagcatgaaagcctgaaaccggtactggagccaacc
tatggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtactttcgggttat
acccttggcggcgcagacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgctccatctttgaagatggagcgaagaaaaacggcatcgatggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatctcac
tccgccgcctatgctttggtttcgtatcagacgctgtggctgaaagctcactatcccgct
gagtttatggcagcggtaatgactgccgatatggacaacaccgagaaggtggttggcctg
gtggacgagtgctggcgcatggggctgaagatcctgccgccggatattaactcgggcctg
tatcattttcacgttaacgatgacggggaaatcgtctatgggatcggcgcgatcaagggc
gtgggtgaggggccgatcgaggcgatcattgaagcgcgtaacaacggcggctacttccgt
gagctgttcgatctgtgcgcccgtaccgataccaaaaaactgaaccgccgcgtgctggaa
aaactgatcatgtccggcgcgtttgaccgtctggggccacaccgcgccgcgctgatgaac
tcgctcggcgatgcgctgaaggcggccgatcagcatgcgaaagcggaagccattggccag
gcggatatgttcggcgtgctggcggaagagccagagcagatcgagcagtcctattccaac
tgccagccgtggccagaacaggtagtgctggatggagagcgggaaacgttaggtctgtac
ctgacggggcacccgatcaaccagtatcttaaagaaattgagcgctatgtcggcggccac
aggcttaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcacgcgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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