Enterobacter hormaechei subsp. xiangfangensis 34399: LI66_10410
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Entry
LI66_10410 CDS
T03707
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
eclx
Enterobacter hormaechei subsp. xiangfangensis 34399
Brite
KEGG Orthology (KO) [BR:
eclx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclx03019
]
LI66_10410
Enzymes [BR:
eclx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LI66_10410
Messenger RNA biogenesis [BR:
eclx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LI66_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
T2SSE
nSTAND3
NACHT
ResIII
AAA_16
PhoH
SLFN-g3_helicase
AAA_23
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AJB81752
LinkDB
All DBs
Position
2159882..2163784
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEHQKLTFSMLMQKLDSLMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPEITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESSGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKTLSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERGQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKASKETPDLLNFEKSMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDRDDW
NWDQVPDHLKITFRVVDDKNKKLLEGRSLSELKDALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEGFAQLHEK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAVDPHRDRAQMLKVENVQQAWQQWLNKLPPARRDDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaccaaaaattgaccttctccatgctgatgcaaaagcttgattcactgatg
ctgcgcgataaacagcggtttgcgcgccgtctgcacggcgttaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggaaatggccaaagagattgaacaggcggcagggaaa
gttgtgctgcgtgaagccgcacgcccggagattacctatccggaaaacctgcccgtcagc
cagaagaaacaggacattcttgaggccgtacgcgaccaccaggtggtgatcgtcgcgggg
gaaaccggttcaggtaaaaccacccagttgccgaaaatctgcatggagctgggccgcggg
ttgaaagggctgatcggtcacacccagccgcgtcgtctggcggcgcgcaccgtggcgaac
cgtattgcggaagagctgcaaacggagccgggcggctgcatcggctacaaggtgcgattc
agcgaccacgtcagcgataacaccatggttaagctgatgacagacggtatcctgctggcg
gaaatccagcaggatcgtctgctgatgcagtacgacaccatcatcatcgatgaagcgcac
gagcgcagcctgaacatcgacttcctgctcggctacctgaaagagctgctgccccggcgt
ccggatctgaaaatcatcatcacctctgcgaccattgacccggagcgtttctcaaaacat
ttcaacaatgcgccgatcattgaagtctcaggccgaacctacccggttgaagtgcgctat
cgcccgattgtggaagaggcggacgataccgagcgcgaccagcttcaggccatcttcgat
gccgtcgacgagctgggcaacgagagttctggcgacattctgatcttcatgagcggcgag
cgcgagatccgggataccgccgatgcgctcagcaaacgcgatctgcgccataccgagatc
ctgccgctgtacgcgcgcctgtccaacagtgagcagaaccgcgtgttccagccgcacagc
ggacgccgcatcgtgctggcgaccaacgtggccgaaacctcgctcaccgtgccgggcatt
aaatacgtgatcgacccgggtacggcgcgcatcagccgctacagctaccgaaccaaagtt
cagcgcctgccgattgagccggtttcccaggcgtcggctaatcagcgtaagggccgctgc
ggccgcgtgtcggaagggatctgtattcgtctttattcggaagacgatttcctgtcgcgc
ccggagtttaccgatccggaaattctgcggaccaacctggcatccgttatcctgcaaatg
accgcgctggggctgggcgatatcgccgccttcccgtttgtggaagcgccggacaagcgc
aacattcaggacggcgtgcgtctgctggaagagctcggggcgattaccaccgacgagcag
gcgacggcctacaagctaacgccattgggccgccagcttagccagttgccggtcgacccg
cgtctggcgcgcatggtgctggaggcgcaaaaacacggctgcgtgcgcgaggcgatgatc
atcacctcggcgctctccattcaggatccgcgcgagcgcccaatggacaagcagcaggcg
tcggatgaaaaacaccgtcgcttccacgataaagagtctgatttcctggcctttgtgaat
ctgtggaactacctgggcgagcagcaaaaaacgctctcttcaaatcagttccgccgtcag
tgccgggtggatttcctcaactacctgcgcgtgcgcgagtggcaggatatctacacccaa
ctgcgccaggtggtaaaagagctgggcattccggtcaacagtgaaccggcggagtaccgc
gaaattcatatcgccttgctgaccggcctgctgtcccatatcgggatgaaggatgcggat
aaacaggaatttaccggcgcacgcaacgcgcgtttctccatcttcccgggctccgggttg
tttaaaaagccgccgaagtggaccatggtcgccgagctggtggaaaccagccgtctgtgg
gggcgtatcgccgcgcgtatcgatccggagtgggttgagccggtggcgcagcacctgctg
aaacgctcatacagcgagccgcactgggagcgcgggcagggcgcggtgatggcgacggaa
aaagtcaccgtctacggcctgccggtggtggccgcgcgtaaggttaactacagccagatc
gatccggcgctgagtcgcgagctgtttatccgccatgcgctggtggagggcgactggcag
acgcgtcatgcgttcttccgcgaaaacctgaagctgcgcgccgaggtggaagagcttgag
cacaagtcccgccgccgcgacattctggtggacgacgagacgctgtttgagttttacgac
cagcgcatcagccacgatgtgatctcggcgcgccatttcgacagctggtggaagaaagcc
agcaaagagaccccggacctgctcaactttgaaaagagcatgctgatcaaagagggcgcg
gagtcggtcagcaagctcgactacccgaacttctggcatcagggcaacctcaagctgcgt
ctgacctatcagtttgagccgggggccgacgcggacggcgtgaccgttcatattccgctg
ccgctgttaaaccaggtcgacgagagcgggtttgagtggcaaattcccggcctgcgccgc
gagctggtcattgcgttaatcaaatccctgcctaaaccggtgcggcgtaactttgtgccg
gcgccgaactacgccgaagcgtttttgggccgcgtcacgccgctggagctgccgctgctg
gacgcgctggagcgtgagttccgacgcatgaccgggaccaccatcgaccgcgacgactgg
aactgggatcaggtgcccgatcacctgaaaatcaccttccgcgtggtggacgataaaaac
aaaaagctgctggaaggccgctcgctttcggaactgaaggacgccctgaagggcaaagtg
caggaaaccctgtctgccgtggcggacgacggtatcgagcagagcgggctgcacatctgg
agctttggtcagcttccggaaagctatgagcagaagcgcgggaactataaggtcaaagcc
tggcccgcgctggtggatgagcgcgatagcgtggcgattaagctctttgacaatccgcag
gaacaacagcagatgatgtggcgcgggctgcgtcgactgcttctgcttaacatcccgtcg
ccgattaagtatctgcacgagaagctgccgaacaaagccaagctggggctctactttaac
ccgtacggtaaggtgctggatctgatcgacgactgcatctcctgcggtgtggataagctg
atccacgaggcgggcggtccggtctggacggaagagggctttgctcagcttcatgaaaag
gtgcgcgcggagctgaacgacaccgtggtggagattgccaaacaggtcgagcagatcctt
accgccgtgttcaatatcaacaagcgcctgaaggggcgggtggatatgaccatggccctg
gggctgtcggacgtgaaggcgcagatggcggggctggtgtatcggggctttgtgaccggc
aacggctttaagcgtctgggcgatacgctgcgttatttgcaggcgattgagaagcgtctg
gagaaaatggcggtcgatccgcatcgcgatcgcgcgcagatgctgaaagtcgaaaacgtg
cagcaggcgtggcagcagtggctcaacaaactgccgccagcgcgtcgcgatgacgacgac
gtgcgggagatccgctggatgatcgaggagctgcgcgtcagcttctttgcccagcagctc
ggtacgccgtatccgatttcggataagcgtatcttgcaggcgatggagcagatctccggc
taa
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