Enterobacter hormaechei subsp. xiangfangensis 34399: LI66_12135
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Entry
LI66_12135 CDS
T03707
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eclx
Enterobacter hormaechei subsp. xiangfangensis 34399
Brite
KEGG Orthology (KO) [BR:
eclx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eclx03016
]
LI66_12135
Enzymes [BR:
eclx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LI66_12135
Transfer RNA biogenesis [BR:
eclx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LI66_12135
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AJB82074
LinkDB
All DBs
Position
2548182..2550116
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSVVPDHPLLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEETADGKLHLTVAIADPTAWIVEGSK
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRAHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDDVSDWLENTGNWKPESDNIAAQIRLLHRVCLSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgatggg
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgtatt
tcggccgttattcataccgaaaaggaacgagagtctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagacgatcgtctttccgtcgtg
ccggaccatcctctcctgaaagatgctattccgtgccgcgccgcgcgtggcgttgagcat
gattttgttgagggtgactgggcggttgctgagatgcgccgtcatcctttaaaaggcgat
cgcggtttctacgccgagcttacccaatacattaccttcggcgacgaccatttcgtccca
tggtgggtgacgctggcgcgccacaacctcgaaaaagaagcgcctgatggcgtggcgact
gaaatgcaggacgaaggtctggaacgtcgcgatctgacggcgctggactttgtcaccatt
gacagcgccagcaccgaggatatggacgatgcgctgtatgccgaagagacagccgatggc
aaactgcatctgaccgtcgccattgccgaccctaccgcatggattgtcgaaggcagcaag
ctggacgagatggccaaagtgcgttcgttcaccaactacctgccgggctttaacattccg
atgctgccgcgtgaactctccgacgatctttgctcgctgcgtgcgcatgaagtgcgtccg
gtgctggcctgtcggatgaccattgcggctgacggtaccattgaagaagatattgaattc
ttcgccgccaccatcgaatccaaagccaagctggcctatgacgacgtgtccgactggctg
gagaacacgggcaactggaaacccgagtcggacaacattgccgcacaaattcgtctgttg
caccgcgtctgcctgagccgcagcgaatggcgtcaaactcacgcgctggtcttcaaagat
cgtccggactaccgttttgtgctgggtgaaaaaggtgaagtgctgaatatcgtcgctgag
ccgcgccgtattgccaaccgcatcgttgaagaagcgatgatttccgccaacatttgtgct
gcacgcgtgctgcgcgacaaattaggctttggcatttacaacgtgcacaccgggtttgat
ccggcgaacaccgaagcgctggctgccctgctgaaaacccatgacgtacacgtcgatcct
gaggaagtgctgaccctgcaaggtttctgcaaactgcgccgcgagctggacgcacagccg
tcagggttcctcgacagccgtattcgccgcttccagtcctttgcggaaatcagcaccgag
cctggcccacacttcggccttggccttgaggcttacgcgacctggacctccccgatccgt
aagtacggcgacatggttaaccatcgtctgctgaaagcgatcatcaaaggggaatctgtt
gcccgcccacaggatgatacgacattgcagatggcagaacgtcgccgtctcaaccgtatg
gcggagcgtgatgtcggcgactggttgtacgcgcgcttcctgaatgataaggcagggact
gatacccgtttcccggctgaaatcattgacatcagccgcggcggtatgcgcgttcgcctg
gtggataatggcgccgttgcctttattcctgccccgttcctgcatgccgtccgcgacgaa
ctggtttgtagccaggaaaacgggaccgtgcaaattaaaggcgaaacggtttacaaggtc
actgacgtgattgatgtcaccatcgctgaagtgcgcatggaaacccgcagtattatcgcg
cgccctgtcgcctga
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