Enterobacter hormaechei subsp. steigerwaltii: LI62_02560
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Entry
LI62_02560 CDS
T03708
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Pathway
ecly02024
Quorum sensing
ecly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI62_02560 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LI62_02560 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecly03019
]
LI62_02560 (hfq)
03036 Chromosome and associated proteins [BR:
ecly03036
]
LI62_02560 (hfq)
Messenger RNA biogenesis [BR:
ecly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LI62_02560 (hfq)
Chromosome and associated proteins [BR:
ecly03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LI62_02560 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AJB60990
UniProt:
A0AAE4E954
LinkDB
All DBs
Position
472779..473090
Genome browser
AA seq
103 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTGSNYHHGSNAQGSSTPAQDSEETE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcattgcgtcgggagcgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggtcagattgagtctttcgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtctataagcacgcgatttct
actgttgttccgtcccgtccggtatctcatcacagcaataacgctggcggcggcactggc
agtaactaccatcacggcagcaacgcgcagggttcttcaacaccagcgcaggacagcgaa
gaaaccgaataa
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