Enterobacter hormaechei subsp. steigerwaltii: LI62_14710
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Entry
LI62_14710 CDS
T03708
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecly03016
]
LI62_14710
Enzymes [BR:
ecly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LI62_14710
Transfer RNA biogenesis [BR:
ecly03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LI62_14710
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Sfi1
Motif
Other DBs
NCBI-ProteinID:
AJB63236
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All DBs
Position
complement(2738133..2739287)
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AA seq
384 aa
AA seq
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MGANKRESDLNYQMITTNDELASLCEVTREFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWAPMRELLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTARQLEYAAADVFYLLPIAGQLMKEAE
ASGWLSAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELNSIGLSGSEIRFHGKTLLALVEKAQQLPEDALP
EPLLNLMDMPGYRKAFKDIKALVQTVAGESKLSAELLASRRQINQLLNWHWKLKPQNGLP
ELVAGWRGELMAERLNTLLEGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagagtccgatttgaattaccagatgatcactaccaacgacgag
ctggcttcgctgtgcgaggtgacgcgtgaatttcccgctatcgccctggatacggaattt
gtccgcacccgaacgtactatccgcagctgggtctgattcagatgtatgacggcaaacac
gtgtcgttgattgaccccctcggcattaccgactgggcgccaatgcgcgagctgttgctg
gataccgccgtgaccaaatatctgcacgcgggcagtgaagatctggaagtctttctcaac
acctttggcatcatgccgcagccgctgattgatacccagatcctcgcggcgttcagcggt
cgtccgctctcctggggcttcgccgcgatggtggaagagtacaccggtctgacgctggat
aagagcgaatcgcgtaccgactggctcgcgcgtccgctgacggcgcgtcagcttgaatac
gccgcggcagacgtcttttacctgctaccgattgccggccagctcatgaaagaggctgag
gcgtccggttggctgtctgccgcactggacgagtgccgcatgacgcagcagcgtcgtcag
gaagtggttgatccgaaagaagcctggcgtgacatcaccaacgcctggcagctgcgcacc
cgtcaactggcctgtctgcaattgctggctgactggcgtctgcgtaaagcgcgtgagcgc
gatctggcggttaacttcgtggtgcgtgaagaacacctgtgggcggtggcgcgctatatg
ccgggtagccttggtgaactgaacagcattggcctttccggaagtgagatccgtttccac
ggtaaaacgctgctcgcgctggtagagaaagctcagcagctgccggaggacgcactgcca
gaaccgctgcttaacctgatggatatgccgggctaccgcaaggcgttcaaagatatcaaa
gcgctggtgcagacggtggcgggggaaagcaaactgagtgccgaactgctggcttcacgt
cgtcagattaaccagctgctgaactggcactggaagttgaaaccgcaaaatggtttaccg
gaactggtcgccggatggcggggggaactgatggccgaacgcctgaataccctgctggaa
gggtatccgcgctaa
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