Enterobacter hormaechei subsp. steigerwaltii: LI62_18245
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Entry
LI62_18245 CDS
T03708
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecly03009
]
LI62_18245
Enzymes [BR:
ecly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LI62_18245
Ribosome biogenesis [BR:
ecly03009
]
Prokaryotic type
rRNA helicases
LI62_18245
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_22
AAA_11
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJB63898
UniProt:
A0AAE4E3L5
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All DBs
Position
3495989..3497317
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEEATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
QKIGRYVEEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcccttgag
agcaaaggctttacacgcccgaccgccattcaggccgcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctacttgctg
cctgtgttgcagcatttgctcgactttccgcgtaaaaaatcaggcccgccgcgcattttg
atcctgaccccgacccgtgaactggcgatgcaggttgccgaacacgcgcgtgagctggcg
gcgaacacccatctggatatcgcgaccatcaccggcggcgtagcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgttgtcgcgacgacgggccgtctgctgcaatac
ataaaagaagagaacttcgactgccgcgcggtggaaacgctgattctcgatgaagctgac
cgcatgctggacatgggctttgcccaggatatcgaacacatcgcgggtgaaacgcgctgg
cgtaatcagacaatgctgttctcggcaacccttgaaggggatgccattaaagatttcgcc
gaacgtctgctggaagatccggtggaagtgtccgctacgccatcgacccgtgagcgtaag
aagatccaccagtggtactaccgcgcagataaccttgagcataaggttgagttgttgaaa
cacctgctgaagcaggaagaggcaacccgtaccatcgtcttcgtacgcaaacgtgagcgc
gtgcatgagctggcagaaatgctgcgcaacgccggcattaacaactgctatctcgaaggt
gaaatggcgcaggttaagcgaaccgaagggattaagcgcctgaccgatggccgcgtgaat
gtgctggttgccaccgatgttgccgcgcgtgggatcgacatcccggacgtgagccacgta
atcaactttgatatgccgcgcagcggtgatacttacctgcaccgtattggtcgtaccggc
cgtgcgggccgcaaaggtattgctatctctctggtagaagcgcacgaccatttgctgcta
cagaaaattggccgctacgttgaggagccgctgaaagctcgcgtgattgacgggcttcgt
ccgaccacacgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaagccgcgcgttaaacagcgccaccgc
gataccaaaaatattggtaagcgccgtaagccaagttctgctgcgccagagacaaaaacg
gaagagtaa
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